Gene detail

Detailed information of pspe_0.1.m1.2255.m1 in Pachyseris speciosa

Genomic Location: Sc0000001:1777284...1778367
NR annotation: CAH3021457.1, unnamed protein product [Porites evermanni]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q96GW7	Brevican core protein OS=Homo sapiens OX=9606 GN=BCAN PE=1 SV=2
Q28062	Brevican core protein OS=Bos taurus OX=9913 GN=BCAN PE=1 SV=1
Q61361	Brevican core protein OS=Mus musculus OX=10090 GN=Bcan PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00059	Lectin_C	Lectin C-type domain	Domain	Interproscan
PF12947	EGF_3	EGF domain	Domain	Interproscan
PF07645	EGF_CA	Calcium-binding EGF domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR018378	Conserved_site	C-type lectin, conserved site	Interproscan
IPR000742	Domain	EGF-like domain	Interproscan
IPR016186	Homologous_superfamily	C-type lectin-like/link domain superfamily	Interproscan
IPR050111	Family	C-type lectin and snaclec domain-containing protein	Interproscan
IPR001304	Domain	C-type lectin-like	Interproscan
IPR000152	PTM	EGF-type aspartate/asparagine hydroxylation site	Interproscan
IPR024731	Domain	EGF domain	Interproscan
IPR016187	Homologous_superfamily	C-type lectin fold	Interproscan
IPR049883	Domain	NOTCH1 EGF-like calcium-binding domain	Interproscan
IPR018097	Conserved_site	EGF-like calcium-binding, conserved site	Interproscan
IPR001881	Domain	EGF-like calcium-binding domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22803	MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0038023	Molecular Function	signaling receptor activity	Interproscan
GO:0005509	Molecular Function	calcium ion binding	Interproscan