Detailed information of pspe_0.1.m1.23830.m1 in Pachyseris speciosa

Genomic Location: Sc0000143:588788...606017
NR annotation: XP_020627005.1, pyruvate dehydrogenase E1 component subunit beta, mitochondrial-like [Orbicella faveolata]
Species Pachyseris speciosa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5RE79Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Pongo abelii OX=9601 GN=PDHB PE=2 SV=1
Q9D051Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Mus musculus OX=10090 GN=Pdhb PE=1 SV=1
P11177Pyruvate dehydrogenase E1 component subunit beta, mitochondrial OS=Homo sapiens OX=9606 GN=PDHB PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004162 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02780
all species →		Transketolase_CTransketolase, C-terminal domainDomainInterproscan
PF02779
all species →		Transket_pyrTransketolase, pyrimidine binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027110
all species →		FamilyPyruvate dehydrogenase E1 component subunit betaInterproscan
IPR009014
all species →		Homologous_superfamilyTransketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain IIInterproscan
IPR005475
all species →		DomainTransketolase-like, pyrimidine-binding domainInterproscan
IPR033248
all species →		DomainTransketolase, C-terminal domainInterproscan
IPR029061
all species →		Homologous_superfamilyThiamin diphosphate-binding foldInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11624
all species →		DEHYDROGENASE RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004739
all species →		Molecular Functionpyruvate dehydrogenase (acetyl-transferring) activityInterproscan
GO:0005967
all species →		Cellular Componentobsolete mitochondrial pyruvate dehydrogenase complexInterproscan
GO:0006086
all species →		Biological Processacetyl-CoA biosynthetic process from pyruvateInterproscan
GO:0003824
all species →		Molecular Functioncatalytic activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K00162PDHB, pdhB; pyruvate dehydrogenase E1 component subunit betaEC:1.2.4.1
Diabetic cardiomyopathyko05415deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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