Detailed information of pspe_0.1.m1.23866.m1 in Pachyseris speciosa

Genomic Location: Sc0000143:1081597...1134092
NR annotation: CAH3117062.1, unnamed protein product [Porites lobata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9EPR5VPS10 domain-containing receptor SorCS2 OS=Mus musculus OX=10090 GN=Sorcs2 PE=1 SV=2
Q96PQ0VPS10 domain-containing receptor SorCS2 OS=Homo sapiens OX=9606 GN=SORCS2 PE=1 SV=3
Q98930Sortilin-related receptor (Fragment) OS=Gallus gallus OX=9031 GN=SORL1 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF18911PKD_4PKD domainDomainInterproscan
PF15902Sortilin-Vps10Sortilin, neurotensin receptor 3,RepeatInterproscan
PF15901Sortilin_CSortilin, neurotensin receptor 3, C-terminalDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR050310FamilyVPS10-related sortilin family receptorsInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR031778DomainSortilin, N-terminalInterproscan
IPR006581DomainVPS10Interproscan
IPR000601DomainPKD domainInterproscan
IPR031777DomainSortilin, C-terminalInterproscan
IPR035986Homologous_superfamilyPKD domain superfamilyInterproscan
IPR022409DomainPKD/Chitinase domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12106SORTILIN RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005794Cellular ComponentGolgi apparatusInterproscan
GO:0006892Biological Processpost-Golgi vesicle-mediated transportInterproscan
GO:0016021Cellular ComponentmembraneInterproscan
GO:0016020Cellular ComponentmembraneInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K27081SORC1; VPS10 domain-containing receptor SorCS1-Membrane traffickingko04131deepkoala

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