Gene detail

Detailed information of pspe_0.1.m1.23929.m1 in Pachyseris speciosa

Genomic Location: Sc0000144:842833...874768
NR annotation: CAH3031235.1, unnamed protein product [Porites evermanni]
Species Pachyseris speciosa · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5T124	UBX domain-containing protein 11 OS=Homo sapiens OX=9606 GN=UBXN11 PE=1 SV=2
Q9D572	UBX domain-containing protein 11 OS=Mus musculus OX=10090 GN=Ubxn11 PE=1 SV=1
Q8R512	UBX domain-containing protein 11 OS=Rattus norvegicus OX=10116 GN=Ubxn11 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004067 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08059 all species →	SEP	SEP domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036241 all species →	Homologous_superfamily	NSFL1 cofactor p47, SEP domain superfamily	Interproscan
IPR012989 all species →	Domain	SEP domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23333 all species →	UBX DOMAIN CONTAINING PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0043130 all species →	Molecular Function	ubiquitin binding	Interproscan
GO:0043161 all species →	Biological Process	proteasome-mediated ubiquitin-dependent protein catabolic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K24353	UBXN11; UBX domain-containing protein 11	-	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.