Detailed information of pspe_0.1.m1.24410.m1 in Pachyseris speciosa

Genomic Location: Sc0000150:324936...327048
NR annotation: KAJ7393794.1, hypothetical protein OS493_003454 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P0825372 kDa type IV collagenase OS=Homo sapiens OX=9606 GN=MMP2 PE=1 SV=2
P3343672 kDa type IV collagenase OS=Rattus norvegicus OX=10116 GN=Mmp2 PE=1 SV=2
O18733Matrix metalloproteinase-9 OS=Canis lupus familiaris OX=9615 GN=MMP9 PE=2 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00040fn2Fibronectin type II domainDomainInterproscan
PF00021UPAR_LY6u-PAR/Ly-6 domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000562DomainFibronectin type II domainInterproscan
IPR013806Homologous_superfamilyKringle-like foldInterproscan
IPR045860Homologous_superfamilySnake toxin-like superfamilyInterproscan
IPR036943Homologous_superfamilyFibronectin type II domain superfamilyInterproscan
IPR016054DomainLy-6 antigen/uPA receptor-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
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 Gene Ontology
GO termsCategoryDescriptionSource
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TOP