Detailed information of pspe_0.1.m1.24702.m1 in Pachyseris speciosa

Genomic Location: Sc0000153:374392...381930
NR annotation: CAH3179565.1, unnamed protein product [Porites evermanni]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P15364Protein amalgam OS=Drosophila melanogaster OX=7227 GN=Ama PE=2 SV=2
Q28260Vascular cell adhesion protein 1 OS=Canis lupus familiaris OX=9615 GN=VCAM1 PE=2 SV=1
P29534Vascular cell adhesion protein 1 OS=Rattus norvegicus OX=10116 GN=Vcam1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13927Ig_3Immunoglobulin domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR007110DomainImmunoglobulin-like domainInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR051427FamilyNectin and Nectin-likeInterproscan
IPR036179Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR003599DomainImmunoglobulin subtypeInterproscan
IPR003598DomainImmunoglobulin subtype 2Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23277NECTIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005912Cellular Componentadherens junctionInterproscan
GO:0007156Biological Processhomophilic cell adhesion via plasma membrane adhesion moleculesInterproscan
GO:0007157Biological Processheterophilic cell-cell adhesion via plasma membrane cell adhesion moleculesInterproscan

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