Detailed information of pspe_0.1.m1.24797.m1 in Pachyseris speciosa

Genomic Location: Sc0000154:690461...705333
NR annotation: CAH3018721.1, unnamed protein product [Porites evermanni]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A6H584Collagen alpha-5(VI) chain OS=Mus musculus OX=10090 GN=Col6a5 PE=1 SV=4
A8TX70Collagen alpha-5(VI) chain OS=Homo sapiens OX=9606 GN=COL6A5 PE=1 SV=1
P32018Collagen alpha-1(XIV) chain OS=Gallus gallus OX=9031 GN=COL14A1 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00084SushiSushi repeat (SCR repeat)DomainInterproscan
PF02494HYRHYR domainDomainInterproscan
PF00092VWAvon Willebrand factor type A domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000436DomainSushi/SCR/CCP domainInterproscan
IPR002035Domainvon Willebrand factor, type AInterproscan
IPR035976Homologous_superfamilySushi/SCR/CCP superfamilyInterproscan
IPR003410DomainHYR domainInterproscan
IPR036465Homologous_superfamilyvon Willebrand factor A-like domain superfamilyInterproscan
IPR050350FamilyComplement & Cell Adhesion RegulatorsInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19325COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAININGInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
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