Detailed information of pspe_0.1.m1.25139.m1 in Pachyseris speciosa

Genomic Location: Sc0000158:1199219...1218196
NR annotation: CAH3151756.1, unnamed protein product [Porites lobata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5R8Q4Protein PAT1 homolog 1 OS=Pongo abelii OX=9601 GN=PATL1 PE=2 SV=1
Q86TB9Protein PAT1 homolog 1 OS=Homo sapiens OX=9606 GN=PATL1 PE=1 SV=2
A2RRV3Protein PAT1 homolog 1 OS=Danio rerio OX=7955 GN=patl1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF09770PAT1Topoisomerase II-associated protein PAT1RepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR039900FamilyPat1-likeInterproscan
IPR019167DomainmRNA decay factor PAT1 domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21551TOPOISOMERASE II-ASSOCIATED PROTEIN PAT1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000290Biological Processdeadenylation-dependent decapping of nuclear-transcribed mRNAInterproscan
GO:0000932Cellular ComponentP-bodyInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0033962Biological ProcessP-body assemblyInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K12617PATL1, PAT1; DNA topoisomerase 2-associated protein PAT1-Messenger RNA biogenesisko03019deepkoala

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