Gene detail

Detailed information of pspe_0.1.m1.25145.m1 in Pachyseris speciosa

Genomic Location: Sc0000158:1164287...1180402
NR annotation: CAH3018109.1, unnamed protein product [Porites evermanni]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

pspe_0.1.m1.25145.m1

AATCTTCGTTTACCTAGCTGAGCGAAGTCTGGTACCTGCACCGAGGCGCCATGtttgtttcaaagaaaacatgagttcgaaaaagaaaagaaacgaagGGCGATCGGGGGAGTCAGTAGAGAAAGCAGAAGAGATTTTTCAAGGTGTTATTCTTTCAGATAGCTTTAACTACAGATTTTTACCAATAACGCTTGAGACGCCCAGGGTACTGCTGCCACTGGTAAATGTTCCTCTTTTGGATTATACCATTGAATTCCTTGTTGAAGCTGGAGTTCAAGAAATCTTTGTTTTCTGCTGTGCACATGCAGATCAAATCAGGAAACATTTAAGTCAGTCAAAATGGACAAGCTCAAGATCACCATGTGATGTGAAAACAATAGTTGTTGAAAACTGTTTGTCACTGGGTGATGCTCTACGAGAAATTGATAGACAGtCTTTACTCAAGAATGACTTTGTTTTAGTCAGTGGTGATGTGGTATCAAATATGAAGTTAGAACAAGTCTTAAAAGAACACAAGGACAGACGGAAAAAAGATAAATCATCATTGATGACCATGGTATTCAAAGTTGCTAACCCTAGACATAGAACAAGATGTCAGGAAGATGATCTTATAGCTGCCATGGATTCAACGACTGGCAGAATTGTACACTGTGAGAAGACGTCCGGcaaaaaacgtttttcttttccCTTGAGTCTGTTTTCGGGCAACAACACTCTTCAGATAAGATATGATCTCTTGGACTGCAACATATGTATATGTTCAACAACAgtACCACAGctatttactgacaattttgaTTACCAAACTAGAGACGACTTTGTTCGAGGAATTCTTGTGAATGAGGAGATAATGGGTAATCAGATCCATTCATTTCTAATCAGTGACAAGTATGCGGCTAGAGTTTCTAATCCATACATGTATGACACAGTCAGCAAAGATATTCTCAGTAGATGGGCCTATCCGATAGCACCAGACAACAGCGTGTTTTTCATGGACTTCTCCTTCTCATTCACAAGACATAATGTCTACTTGGATAGTGAGCTGTCACTAGCCAGGGACTGTGTGTTAGAAGAAAATGTTTTAATAAGTAAAGGAACCTCAGTGGGGGCTGGAACAGTCATCACTAATTCTGTGATAGGCAGAAACTGTGTTATAGGTGATTTTGTTCACCTAGATGGTGTCCATCTCTGGGATAACGTGAGAGTTGAAGATGGCTGTAACATTTCCAAATCAATCctttgcaaaaatgttcataTAAAAAGGAATGTCACAATCTCATCTGGATCATTGATTTCATTTAATGTGGTGGTTGGACCTGATTTAGTTCTTCCTCCAGGAGTGAAAATAACGCTAAAGAAACCAAACAAAGATGATTCTGGCTTTGGCATGGATGAACTGTCTCTCCAAGAGAAGTCAGCACCTGAGCAAGGCAATGGGTTCATTGCTGAAGAAGTGGGCAGTGAAGGACAAGGCTACATCTGGAGACCTGAAGCTGATTCGGATGATGAAAGCGAACAAGTGCAAGACATTTGGGTCTGTAGGTGTTGACAGAGTCAGCTCCAGTGAAGATAATGTAAGTTCAGTGTCAAGTGATGAAGAATCCCCTCCTGGCAGCCCACCACCCGAGGACGGCAGGTTTTTTTACACAGAAGTACTGGAATCAATCAGACATGGAGTAGCTGATCATGTGGACCCTGAAAATATCATTCTGGAAATAAATGCGTCCAAGTTCGCGTATAACGTGACGTTTCATGAGCGGAATCAAGCGGTGGTCAAATCATTACTGGAGTCTTCTCTTCACGATCCCTCTCTATCAAGACAAGACTTATCCAGAATCTTAGAAGGGCAACAGAGTATCTGCTGCCAGTCATTTCCAACTACATTAACATTAAGAAATCTGATGATGGCCAAAGAGACGCACTGAACGCAACTGAGGAATTTTTCCTTCAAGCCATGTGGGCTGCTCCGCTTTCTCAAGTGTTTCTTCACTTGTTATACGACAAAGAAATCCTTGAAGAGTCCGTCATTCTTCAGTGGTACTTACGCTTGCCCGCAGGGACAGAGGACAGCGGTTTTGAACCCCAGCGGAAACAATTGCGACAACAGATTTCTCCCTTTATCACGTGGCTGCAAGAAGCAGAGGAAGAaagtgatgacgatgacgacggtGATGAGTGAACAGTTATAAAATTCCCAAGTTAGAAAATGTATTAAAGTTTAACAAACG

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02020	W2	eIF4-gamma/eIF5/eIF2-epsilon	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003307	Domain	W2 domain	Interproscan
IPR016024	Homologous_superfamily	Armadillo-type fold	Interproscan

PANTHER

PANTHER term	Description	Source
-	-	-

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan