Gene detail

Detailed information of pspe_0.1.m1.25681.m1 in Pachyseris speciosa

Genomic Location: Sc0000165:38529...44308
NR annotation: KAJ7390553.1, A disintegrin and metalloproteinase with thrombospondin motif [Desmophyllum pertusum]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q8TE59	A disintegrin and metalloproteinase with thrombospondin motifs 19 OS=Homo sapiens OX=9606 GN=ADAMTS19 PE=1 SV=3
Q86TH1	ADAMTS-like protein 2 OS=Homo sapiens OX=9606 GN=ADAMTSL2 PE=1 SV=1
Q7TSK7	ADAMTS-like protein 2 OS=Mus musculus OX=10090 GN=Adamtsl2 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05986	ADAMTS_spacer1	ADAM-TS Spacer 1	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR050439	Family	ADAMTS and ADAMTS-like	Interproscan
IPR036383	Homologous_superfamily	Thrombospondin type-1 (TSP1) repeat superfamily	Interproscan
IPR000884	Repeat	Thrombospondin type-1 (TSP1) repeat	Interproscan
IPR010294	Domain	ADAMTS/ADAMTS-like, Spacer 1	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13723	ADAMTS A DISINTEGRIN AND METALLOPROTEASE WITH THROMBOSPONDIN MOTIFS PROTEASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004222	Molecular Function	metalloendopeptidase activity	Interproscan
GO:0006508	Biological Process	proteolysis	Interproscan
GO:0030198	Biological Process	extracellular matrix organization	Interproscan
GO:0031012	Cellular Component	extracellular matrix	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K20796	PRDM7_9; [histone H3]-lysine4 N-trimethyltransferase PRDM7/9	EC:2.1.1.354	Chromosome and associated proteins	ko03036	deepkoala