Detailed information of pspe_0.1.m1.25717.m1 in Pachyseris speciosa

Genomic Location: Sc0000165:630590...650686
NR annotation: XP_015763335.1, PREDICTED: outer dense fiber protein 3-like [Acropora digitifera]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8AVY1Ciliary microtubule associated protein 1A OS=Xenopus laevis OX=8355 GN=cimap1a PE=2 SV=1
Q96PU9Ciliary microtubule associated protein 1A OS=Homo sapiens OX=9606 GN=CIMAP1A PE=1 SV=1
Q5EB30Ciliary microtubule associated protein 1A OS=Xenopus tropicalis OX=8364 GN=cimap1a PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07004SHIPPO-rptSperm-tail PG-rich repeatRepeatInterproscan
PF00270DEADDEAD/DEAH box helicaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR051291FamilyCiliary Microtubule AssociatedInterproscan
IPR010736RepeatSperm-tail PG-rich repeatInterproscan
IPR011545DomainDEAD/DEAH box helicase domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21580SHIPPO-1-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005856Cellular ComponentcytoskeletonInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan

TOP