Detailed information of pspe_0.1.m1.26263.m1 in Pachyseris speciosa

Genomic Location: Sc0000172:471799...499255
NR annotation: XP_020619363.1, glutamate receptor ionotropic, kainate 3-like [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9Z2W8Glutamate receptor 4 OS=Mus musculus OX=10090 GN=Gria4 PE=1 SV=2
P19493Glutamate receptor 4 OS=Rattus norvegicus OX=10116 GN=Gria4 PE=1 SV=1
P42262Glutamate receptor 2 OS=Homo sapiens OX=9606 GN=GRIA2 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00060Lig_chanLigand-gated ion channelFamilyInterproscan
PF10613Lig_chan-Glu_bdLigated ion channel L-glutamate- and glycine-binding siteDomainInterproscan
PF01094ANF_receptorReceptor family ligand binding regionFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001320DomainIonotropic glutamate receptor, C-terminalInterproscan
IPR019594DomainIonotropic glutamate receptor, L-glutamate and glycine-binding domainInterproscan
IPR028082Homologous_superfamilyPeriplasmic binding protein-like IInterproscan
IPR001638DomainSolute-binding protein family 3/N-terminal domain of MltFInterproscan
IPR001508FamilyIonotropic glutamate receptor, metazoaInterproscan
IPR015683FamilyIonotropic glutamate receptorInterproscan
IPR001828DomainReceptor, ligand binding regionInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR18966IONOTROPIC GLUTAMATE RECEPTORInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0015276Molecular Functionligand-gated monoatomic ion channel activityInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005216Molecular Functionmonoatomic ion channel activityInterproscan
GO:0006811Biological Processmonoatomic ion transportInterproscan
GO:0038023Molecular Functionsignaling receptor activityInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan

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