Detailed information of pspe_0.1.m1.26425.m1 in Pachyseris speciosa

Genomic Location: Sc0000174:565019...567202
NR annotation: CAH3024598.1, unnamed protein product [Porites evermanni]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
E7FAM5E3 ubiquitin-protein ligase TRIM71 OS=Danio rerio OX=7955 GN=trim71 PE=1 SV=1
F6QEU4E3 ubiquitin-protein ligase TRIM71 OS=Xenopus tropicalis OX=8364 GN=trim71 PE=3 SV=1
Q1PRL4E3 ubiquitin-protein ligase TRIM71 OS=Gallus gallus OX=9031 GN=TRIM71 PE=2 SV=1
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|RING

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01436NHLNHL repeatRepeatInterproscan
PF00643zf-B_boxB-box zinc fingerDomainInterproscan
PF00630FilaminFilamin/ABP280 repeatDomainInterproscan
PF13445zf-RING_UBOXRING-type zinc-fingerDomainInterproscan
PF17170DUF51286-bladed beta-propellerRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000315DomainB-box-type zinc fingerInterproscan
IPR001258RepeatNHL repeatInterproscan
IPR011042Homologous_superfamilySix-bladed beta-propeller, TolB-likeInterproscan
IPR001298RepeatFilamin/ABP280 repeatInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR017907Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR047153FamilyTRIM45/56/19Interproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR017868RepeatFilamin/ABP280 repeat-likeInterproscan
IPR027370DomainZinc finger, RING-type, eukaryoticInterproscan
IPR014756Homologous_superfamilyImmunoglobulin E-setInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR25462BONUS, ISOFORM C-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

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