Gene detail

Detailed information of pspe_0.1.m1.26808.m1 in Pachyseris speciosa

Genomic Location: Sc0000178:1165074...1165436
NR annotation: XP_015769294.1, PREDICTED: late histone H2B.L4-like [Acropora digitifera]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
P0C1H4	Histone H2B 5 OS=Gallus gallus OX=9031 GN=H2B-V PE=1 SV=2
Q9PSW9	Histone H2B 8 OS=Gallus gallus OX=9031 GN=H2B-VIII PE=1 SV=3
P35069	Histone H2B.3 OS=Tigriopus californicus OX=6832 PE=3 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00125	Histone	Core histone H2A/H2B/H3/H4	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR009072	Homologous_superfamily	Histone-fold	Interproscan
IPR000558	Family	Histone H2B	Interproscan
IPR007125	Domain	Histone H2A/H2B/H3	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23428	HISTONE H2B	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0046982	Molecular Function	protein heterodimerization activity	Interproscan
GO:0000786	Cellular Component	nucleosome	Interproscan
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0030527	Molecular Function	structural constituent of chromatin	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K11252	H2B; histone H2B	-	Exosome	ko04147	deepkoala