Detailed information of pspe_0.1.m1.26930.m1 in Pachyseris speciosa

Genomic Location: Sc0000180:641675...700863
NR annotation: XP_020612302.1, DNA (cytosine-5)-methyltransferase 1-like [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q92072DNA (cytosine-5)-methyltransferase 1 OS=Gallus gallus OX=9031 GN=DNMT1 PE=1 SV=1
Q27746DNA (cytosine-5)-methyltransferase PliMCI OS=Paracentrotus lividus OX=7656 GN=DNMT PE=2 SV=1
P26358DNA (cytosine-5)-methyltransferase 1 OS=Homo sapiens OX=9606 GN=DNMT1 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02008zf-CXXCCXXC zinc finger domainDomainInterproscan
PF01426BAHBAH domainDomainInterproscan
PF06464DMAP_bindingDMAP1-binding DomainDomainInterproscan
PF12047DNMT1-RFDCytosine specific DNA methyltransferase replication foci domainDomainInterproscan
PF00145DNA_methylaseC-5 cytosine-specific DNA methylaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002857DomainZinc finger, CXXC-typeInterproscan
IPR001025DomainBromo adjacent homology (BAH) domainInterproscan
IPR010506DomainDMAP1-binding domainInterproscan
IPR029063Homologous_superfamilyS-adenosyl-L-methionine-dependent methyltransferase superfamilyInterproscan
IPR031303Conserved_siteDNA methylase, C-5 cytosine-specific, conserved siteInterproscan
IPR001525FamilyC-5 cytosine methyltransferaseInterproscan
IPR043151Homologous_superfamilyBromo adjacent homology (BAH) domain superfamilyInterproscan
IPR022702DomainDNA (cytosine-5)-methyltransferase 1, replication foci domainInterproscan
IPR017198FamilyDNA (cytosine-5)-methyltransferase 1-likeInterproscan
IPR050390FamilyDNA Cytosine-5 MethyltransferaseInterproscan
IPR018117Active_siteDNA methylase, C-5 cytosine-specific, active siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10629CYTOSINE-SPECIFIC METHYLTRANSFERASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0003682Molecular Functionchromatin bindingInterproscan
GO:0008168Molecular Functionmethyltransferase activityInterproscan
GO:0003886Molecular FunctionDNA (cytosine-5-)-methyltransferase activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006346Biological ProcessDNA methylation-dependent constitutive heterochromatin formationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K00558DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1EC:2.1.1.37
Prokaryotic defense systemko02048deepkoala

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