Detailed information of pspe_0.1.m1.27345.m1 in Pachyseris speciosa

Genomic Location: Sc0000186:1277...5305
NR annotation: XP_020605455.1, tubulin beta chain-like isoform X2 [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P11833Tubulin beta chain OS=Paracentrotus lividus OX=7656 PE=2 SV=1
P09206Tubulin beta-3 chain OS=Gallus gallus OX=9031 PE=2 SV=1
Q3MHM5Tubulin beta-4B chain OS=Bos taurus OX=9913 GN=TUBB4B PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03953Tubulin_CTubulin C-terminal domainDomainInterproscan
PF00091TubulinTubulin/FtsZ family, GTPase domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR037103Homologous_superfamilyTubulin/FtsZ-like, C-terminal domainInterproscan
IPR018316DomainTubulin/FtsZ, 2-layer sandwich domainInterproscan
IPR017975Conserved_siteTubulin, conserved siteInterproscan
IPR008280Homologous_superfamilyTubulin/FtsZ, C-terminalInterproscan
IPR000217FamilyTubulinInterproscan
IPR003008DomainTubulin/FtsZ, GTPase domainInterproscan
IPR036525Homologous_superfamilyTubulin/FtsZ, GTPase domain superfamilyInterproscan
IPR002453FamilyBeta tubulinInterproscan
IPR023123Homologous_superfamilyTubulin, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11588TUBULINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005525Molecular FunctionGTP bindingInterproscan
GO:0005874Cellular ComponentmicrotubuleInterproscan
GO:0007017Biological Processmicrotubule-based processInterproscan
GO:0000226Biological Processmicrotubule cytoskeleton organizationInterproscan
GO:0000278Biological Processmitotic cell cycleInterproscan
GO:0005200Molecular Functionstructural constituent of cytoskeletonInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0003924Molecular FunctionGTPase activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K07375TUBB; tubulin beta-Exosomeko04147deepkoala

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