Detailed information of pspe_0.1.m1.27845.m1 in Pachyseris speciosa

Genomic Location: Sc0000193:443231...471256
NR annotation: XP_020627435.1, putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
F6RRD7Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 OS=Bos taurus OX=9913 GN=RPAP2 PE=2 SV=1
Q8IXW5Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 OS=Homo sapiens OX=9606 GN=RPAP2 PE=1 SV=1
Q5RA37Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 OS=Pongo abelii OX=9601 GN=RPAP2 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04181RPAP2_Rtr1Rtr1/RPAP2 familyFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR007308DomainRtr1/RPAP2 domainInterproscan
IPR038534Homologous_superfamilyRtr1/RPAP2 domain superfamilyInterproscan
IPR039693FamilyRtr1/RPAP2Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14732UNCHARACTERIZEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0008420Molecular FunctionRNA polymerase II CTD heptapeptide repeat phosphatase activityInterproscan
GO:0043175Molecular FunctionRNA polymerase core enzyme bindingInterproscan
GO:0070940Biological Processobsolete dephosphorylation of RNA polymerase II C-terminal domainInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K20827RPAP2; RNA polymerase II-associated protein 2EC:3.1.3.16
Transcription machineryko03021deepkoala

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