Detailed information of pspe_0.1.m1.28220.m1 in Pachyseris speciosa

Genomic Location: Sc0000198:690958...709819
NR annotation: CAH3133867.1, unnamed protein product, partial [Porites lobata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q28343Aggrecan core protein OS=Canis lupus familiaris OX=9615 GN=ACAN PE=2 SV=2
Q28670Aggrecan core protein OS=Oryctolagus cuniculus OX=9986 GN=ACAN PE=2 SV=2
P02707Hepatic lectin OS=Gallus gallus OX=9031 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12947EGF_3EGF domainDomainInterproscan
PF00059Lectin_CLectin C-type domainDomainInterproscan
PF07648Kazal_2Kazal-type serine protease inhibitor domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR018378Conserved_siteC-type lectin, conserved siteInterproscan
IPR001304DomainC-type lectin-likeInterproscan
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR036056Homologous_superfamilyFibrinogen-like, C-terminalInterproscan
IPR024731DomainEGF domainInterproscan
IPR037221Homologous_superfamilyH-type lectin domain superfamilyInterproscan
IPR002350DomainKazal domainInterproscan
IPR016187Homologous_superfamilyC-type lectin foldInterproscan
IPR036058Homologous_superfamilyKazal domain superfamilyInterproscan
IPR051004FamilyDendritic cell-specific ICAM-grabbing non-integrin domain-containing proteinInterproscan
IPR016186Homologous_superfamilyC-type lectin-like/link domain superfamilyInterproscan
IPR002181DomainFibrinogen, alpha/beta/gamma chain, C-terminal globular domainInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22802C-TYPE LECTIN SUPERFAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0009897Cellular Componentexternal side of plasma membraneInterproscan
GO:0030246Molecular Functioncarbohydrate bindingInterproscan
GO:0044419Biological Processbiological process involved in interspecies interaction between organismsInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan

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