Detailed information of pspe_0.1.m1.28588.m1 in Pachyseris speciosa

Genomic Location: Sc0000204:14632...27073
NR annotation: XP_022780352.1, cartilage oligomeric matrix protein-like [Stylophora pistillata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q1L8P7Thrombospondin-3b OS=Danio rerio OX=7955 GN=thbs3b PE=3 SV=1
P35445Cartilage oligomeric matrix protein OS=Bos taurus OX=9913 GN=COMP PE=1 SV=2
P49747Cartilage oligomeric matrix protein OS=Homo sapiens OX=9606 GN=COMP PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05735TSP_CThrombospondin C-terminal regionFamilyInterproscan
PF02412TSP_3Thrombospondin type 3 repeatDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR008859DomainThrombospondin, C-terminalInterproscan
IPR003367RepeatThrombospondin, type 3-like repeatInterproscan
IPR028974Homologous_superfamilyTSP type-3 repeatInterproscan
IPR017897RepeatThrombospondin, type 3 repeatInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10199THROMBOSPONDINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0005576Cellular Componentextracellular regionInterproscan
GO:0007155Biological Processcell adhesionInterproscan
GO:0062023Cellular Componentcollagen-containing extracellular matrixInterproscan

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