Detailed information of pspe_0.1.m1.28908.m1 in Pachyseris speciosa

Genomic Location: Sc0000208:615773...630825
NR annotation: CAH3127282.1, unnamed protein product [Porites lobata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
E9PVD3Protocadherin-16 OS=Mus musculus OX=10090 GN=Dchs1 PE=1 SV=1
D4ACX8Protocadherin-16 OS=Rattus norvegicus OX=10116 GN=Dchs1 PE=3 SV=2
Q96JQ0Protocadherin-16 OS=Homo sapiens OX=9606 GN=DCHS1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01049CADH_Y-type_LIRCadherin, Y-type LIR-motifFamilyInterproscan
PF00028CadherinCadherin domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR015919Homologous_superfamilyCadherin-like superfamilyInterproscan
IPR002126DomainCadherin-likeInterproscan
IPR020894Conserved_siteCadherin conserved siteInterproscan
IPR000233DomainCadherin, Y-type LIR-motifInterproscan
IPR027397Homologous_superfamilyCatenin binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24026FAT ATYPICAL CADHERIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0007156Biological Processhomophilic cell adhesion via plasma membrane adhesion moleculesInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0007155Biological Processcell adhesionInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K16507DCHS1_2, PCDH16_23; protocadherin-16/23-Cell adhesion moleculesko04515deepkoala

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