Detailed information of pspe_0.1.m1.29405.m1 in Pachyseris speciosa

Genomic Location: Sc0000215:297095...313675
NR annotation: XP_029208805.2, flap endonuclease GEN homolog 1-like [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q17RS7Flap endonuclease GEN homolog 1 OS=Homo sapiens OX=9606 GN=GEN1 PE=1 SV=2
Q8BMI4Flap endonuclease GEN homolog 1 OS=Mus musculus OX=10090 GN=Gen1 PE=1 SV=2
Q8W5R1Single-strand DNA endonuclease 1 OS=Oryza sativa subsp. japonica OX=39947 GN=SEND1 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00867XPG_IXPG I-regionFamilyInterproscan
PF18704Chromo_2Chromatin organization modifier domain 2DomainInterproscan
PF00752XPG_NXPG N-terminal domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006086DomainXPG-I domainInterproscan
IPR036279Homologous_superfamily5'-3' exonuclease, C-terminal domain superfamilyInterproscan
IPR041012DomainFlap endonuclease GEN, chromatin organization modifier domainInterproscan
IPR029060Homologous_superfamilyPIN-like domain superfamilyInterproscan
IPR006085DomainXPG, N-terminalInterproscan
IPR006084FamilyXPG/Rad2 endonucleaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11081FLAP ENDONUCLEASE FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004518Molecular Functionnuclease activityInterproscan
GO:0000400Molecular Functionfour-way junction DNA bindingInterproscan
GO:0017108Molecular Function5'-flap endonuclease activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K15338GEN1, YEN1; holliday junction resolvase GEN1/YEN1EC:3.1.-.-
DNA repair and recombination proteinsko03400deepkoala

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