Detailed information of pspe_0.1.m1.29464.m1 in Pachyseris speciosa

Genomic Location: Sc0000216:265869...309621
NR annotation: CAH3179051.1, unnamed protein product [Porites lobata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P41515DNA topoisomerase 2-alpha OS=Cricetulus griseus OX=10029 GN=TOP2A PE=2 SV=1
Q01320DNA topoisomerase 2-alpha OS=Mus musculus OX=10090 GN=Top2a PE=1 SV=2
O46374DNA topoisomerase 2-alpha OS=Sus scrofa OX=9823 GN=TOP2A PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF16898TOPRIM_CC-terminal associated domain of TOPRIMFamilyInterproscan
PF00204DNA_gyraseBDNA gyrase BDomainInterproscan
PF01751ToprimToprim domainFamilyInterproscan
PF02518HATPase_cHistidine kinase-, DNA gyrase B-, and HSP90-like ATPaseDomainInterproscan
PF00521DNA_topoisoIVDNA gyrase/topoisomerase IV, subunit AFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001154FamilyDNA topoisomerase II, eukaryotic-typeInterproscan
IPR050634FamilyDNA Topoisomerase II EnzymeInterproscan
IPR031660DomainC-terminal associated domain of TOPRIMInterproscan
IPR002205DomainDNA topoisomerase, type IIA, domain AInterproscan
IPR014721Homologous_superfamilySmall ribosomal subunit protein uS5 domain 2-type fold, subgroupInterproscan
IPR013758Homologous_superfamilyDNA topoisomerase, type IIA, domain A, alpha-betaInterproscan
IPR036890Homologous_superfamilyHistidine kinase/HSP90-like ATPase superfamilyInterproscan
IPR013757Homologous_superfamilyDNA topoisomerase, type IIA, alpha-helical domain superfamilyInterproscan
IPR013506DomainDNA topoisomerase, type IIA, subunit B, domain 2Interproscan
IPR003594DomainHistidine kinase/HSP90-like ATPaseInterproscan
IPR018522Conserved_siteDNA topoisomerase, type IIA, conserved siteInterproscan
IPR006171DomainTOPRIM domainInterproscan
IPR020568Homologous_superfamilyRibosomal protein uS5 domain 2-type superfamilyInterproscan
IPR013760Homologous_superfamilyDNA topoisomerase, type IIA-like domain superfamilyInterproscan
IPR013759Homologous_superfamilyDNA topoisomerase, type IIA, subunit B, C-terminalInterproscan
IPR001241FamilyDNA topoisomerase, type IIAInterproscan
IPR034157DomainDNA topoisomerase 2, TOPRIM domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10169DNA TOPOISOMERASE/GYRASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003918Molecular FunctionDNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006265Biological ProcessDNA topological changeInterproscan
GO:0000712Biological Processresolution of meiotic recombination intermediatesInterproscan
GO:0000819Biological Processsister chromatid segregationInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006259Biological ProcessDNA metabolic processInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K03164TOP2; DNA topoisomerase IIEC:5.6.2.2
Chromosome and associated proteinsko03036deepkoala

TOP