Detailed information of pspe_0.1.m1.31249.m1 in Pachyseris speciosa

Genomic Location: Sc0000243:196582...202107
NR annotation: CAH3138538.1, unnamed protein product [Porites lobata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q8TDB6E3 ubiquitin-protein ligase DTX3L OS=Homo sapiens OX=9606 GN=DTX3L PE=1 SV=1
Q56R14E3 ubiquitin-protein ligase TRIM33 OS=Xenopus laevis OX=8355 GN=trim33 PE=1 SV=1
Q8AW93E3 ubiquitin-protein ligase DTX1 OS=Xenopus laevis OX=8355 GN=dtx1 PE=2 SV=1
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|RING

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00630FilaminFilamin/ABP280 repeatDomainInterproscan
PF13923zf-C3HC4_2Zinc finger, C3HC4 type (RING finger)DomainInterproscan
PF00643zf-B_boxB-box zinc fingerDomainInterproscan
PF18102DTCDeltex C-terminal domainDomainInterproscan
PF13639zf-RING_2Ring finger domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001841DomainZinc finger, RING-typeInterproscan
IPR017868RepeatFilamin/ABP280 repeat-likeInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR000315DomainB-box-type zinc fingerInterproscan
IPR014756Homologous_superfamilyImmunoglobulin E-setInterproscan
IPR039399Homologous_superfamilyDeltex, C-terminal domain superfamilyInterproscan
IPR017907Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR001298RepeatFilamin/ABP280 repeatInterproscan
IPR039396DomainDeltex, C-terminalInterproscan
IPR047153FamilyTRIM45/56/19Interproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR25462BONUS, ISOFORM C-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0006513Biological Processprotein monoubiquitinationInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan

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