Detailed information of pspe_0.1.m1.31465.m1 in Pachyseris speciosa

Genomic Location: Sc0000246:265227...267974
NR annotation: XP_015752659.1, PREDICTED: ubiquitin conjugation factor E4 A-like, partial [Acropora digitifera]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
E9Q735Ubiquitin conjugation factor E4 A OS=Mus musculus OX=10090 GN=Ube4a PE=1 SV=1
A5PKG6Ubiquitin conjugation factor E4 A OS=Bos taurus OX=9913 GN=UBE4A PE=2 SV=1
Q14139Ubiquitin conjugation factor E4 A OS=Homo sapiens OX=9606 GN=UBE4A PE=1 SV=2
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|U-box

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04564U-boxU-box domainDomainInterproscan
PF10408Ufd2P_coreUbiquitin elongating factor coreFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003613DomainU-box domainInterproscan
IPR019474DomainUbiquitin conjugation factor E4, coreInterproscan
IPR045132FamilyUbiquitin conjugation factor E4Interproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13931UBIQUITINATION FACTOR E4Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004842Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0016567Biological Processprotein ubiquitinationInterproscan
GO:0000151Cellular Componentubiquitin ligase complexInterproscan
GO:0006511Biological Processubiquitin-dependent protein catabolic processInterproscan
GO:0034450Molecular Functionubiquitin-ubiquitin ligase activityInterproscan
GO:0000209Biological Processprotein polyubiquitinationInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0030433Biological Processobsolete ubiquitin-dependent ERAD pathwayInterproscan
GO:0036503Biological ProcessERAD pathwayInterproscan

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