Detailed information of pspe_0.1.m1.32003.m1 in Pachyseris speciosa

Genomic Location: Sc0000254:325032...370868
NR annotation: CAH3148369.1, unnamed protein product [Porites lobata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q16526Cryptochrome-1 OS=Homo sapiens OX=9606 GN=CRY1 PE=1 SV=1
P97784Cryptochrome-1 OS=Mus musculus OX=10090 GN=Cry1 PE=1 SV=1
Q32Q86Cryptochrome-1 OS=Rattus norvegicus OX=10116 GN=Cry1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00875DNA_photolyaseDNA photolyaseDomainInterproscan
PF03441FAD_binding_7FAD binding domain of DNA photolyaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036134Homologous_superfamilyCryptochrome/DNA photolyase, FAD-binding domain-like superfamilyInterproscan
IPR006050DomainDNA photolyase, N-terminalInterproscan
IPR036155Homologous_superfamilyCryptochrome/photolyase, N-terminal domain superfamilyInterproscan
IPR014729Homologous_superfamilyRossmann-like alpha/beta/alpha sandwich foldInterproscan
IPR002081FamilyCryptochrome/DNA photolyase class 1Interproscan
IPR005101DomainCryptochrome/DNA photolyase, FAD-binding domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11455CRYPTOCHROMEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0032922Biological Processcircadian regulation of gene expressionInterproscan
GO:0043153Biological Processentrainment of circadian clock by photoperiodInterproscan
GO:0045892Biological Processnegative regulation of DNA-templated transcriptionInterproscan
GO:0071949Molecular FunctionFAD bindingInterproscan

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