Detailed information of pspe_0.1.m1.32016.m1 in Pachyseris speciosa

Genomic Location: Sc0000254:614492...622382
NR annotation: CAH3148390.1, unnamed protein product, partial [Porites lobata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q08DH3Probable tRNA methyltransferase 9B OS=Bos taurus OX=9913 GN=TRMT9B PE=2 SV=1
Q80WQ4Probable tRNA methyltransferase 9B OS=Mus musculus OX=10090 GN=Trmt9b PE=1 SV=1
Q9P272Probable tRNA methyltransferase 9B OS=Homo sapiens OX=9606 GN=TRMT9B PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08241Methyltransf_11Methyltransferase domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR051422FamilyAlkB Family tRNA Methyltransferase/DioxygenaseInterproscan
IPR029063Homologous_superfamilyS-adenosyl-L-methionine-dependent methyltransferase superfamilyInterproscan
IPR013216DomainMethyltransferase type 11Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13069UNCHARACTERIZEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000049Molecular FunctiontRNA bindingInterproscan
GO:0002098Biological ProcesstRNA wobble uridine modificationInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0030488Biological ProcesstRNA methylationInterproscan
GO:0106335Molecular FunctiontRNA (5-carboxymethyluridine(34)-5-O)-methyltransferase activityInterproscan
GO:0008757Molecular FunctionS-adenosylmethionine-dependent methyltransferase activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K10770ALKBH8, TRM9; alkylated DNA repair protein alkB homolog 8EC:1.14.11.-
EC:2.1.1.229
Transfer RNA biogenesisko03016deepkoala

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