Detailed information of pspe_0.1.m1.32334.m1 in Pachyseris speciosa

Genomic Location: Sc0000258:878955...908068
NR annotation: CAH3113586.1, unnamed protein product [Porites lobata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P53544Homeobox protein goosecoid OS=Danio rerio OX=7955 GN=gsc PE=2 SV=1
Q9UBX0Homeobox expressed in ES cells 1 OS=Homo sapiens OX=9606 GN=HESX1 PE=1 SV=1
A1YGA2Homeobox expressed in ES cells 1 OS=Pan paniscus OX=9597 GN=HESX1 PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00046HomeodomainHomeodomainDomainInterproscan
PF13837Myb_DNA-bind_4Myb/SANT-like DNA-binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001356DomainHomeobox domainInterproscan
IPR044822DomainMyb/SANT-like DNA-binding domain 4Interproscan
IPR010921Homologous_superfamilyTrp repressor/replication initiatorInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45793HOMEOBOX PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0043565Molecular Functionsequence-specific DNA bindingInterproscan

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