Detailed information of pspe_0.1.m1.32933.m1 in Pachyseris speciosa

Genomic Location: Sc0000268:392547...411516
NR annotation: XP_020601070.1, APOBEC1 complementation factor-like isoform X1 [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9NQ94APOBEC1 complementation factor OS=Homo sapiens OX=9606 GN=A1CF PE=1 SV=1
Q923K9APOBEC1 complementation factor OS=Rattus norvegicus OX=10116 GN=A1cf PE=1 SV=1
Q5YD48APOBEC1 complementation factor OS=Mus musculus OX=10090 GN=A1cf PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF14709DND1_DSRMdouble strand RNA binding domain from DEAD END PROTEIN 1DomainInterproscan
PF00076RRM_1RNA recognition motifDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000504DomainRNA recognition motif domainInterproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR044461DomainA1CF, double-stranded RNA binding domainInterproscan
IPR006535FamilyHnRNP R/Q splicing factorInterproscan
IPR014720DomainDouble-stranded RNA-binding domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21245HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003729Molecular FunctionmRNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan

TOP