Gene detail

Detailed information of pspe_0.1.m1.33391.m1 in Pachyseris speciosa

Genomic Location: Sc0000275:522381...528238
NR annotation: CAH3161884.1, unnamed protein product [Porites lobata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

pspe_0.1.m1.33391.m1

GTCTTTGTTAATTTATAGCCGATGGGAGGGTGCTCATCGGCTGTGGCGCCTGAGGACCCAAACGGACAGCAAGCTGCTAAGAACAACTGGTGCGCCTGTTGCGGCTCAAGACAAGATTCAACGGCCGCTCTTCTGGCGAAGAAAGAAAGAGATCTTGACTGTGAACGGCCGTCACCAGAGGAAGCAAAGAAATGGCAGACGTCGTTTGAATCGGTGCTGAAGCACAAGTTTGGAGTACAGCTGTTTCAGGATTTTCTTCGTTCTCAGTACGGAGAAGAGAACCTCAACTTTTGGCTAGCGGTGGAAGATTACAAGCAAGTTAACGACGACAGCAGAGCGGAGCGAGCACGGATAATCTACGAGGACTATGTTTCCACTCTGTCGCCCACTGAGATAAGTCTGGACGCTAAAGTAAGAGCAGAGATCGACAACAATATGAACAATCCCACCGAGGACACCTTCCAAGTGGCCCAGGACCATATTTTCACACTCATGTACCATGACTGTTTTCCAAGATTCATAAAATCAAAACATTATAAACAGCTCTTGAAGAGACATTGACCACGACTTTGACGTATGACTCGGATTTCACTAAAGCCTCCGTTGATTCAGTTTCTGTTTCAGTTAATCAACTTCTTCAAGCACAGCCTtggaaaagaaaaattcttccTTGGTGTTTTAACTCGAAACTATTACCTGGTGACAACCTGGATTTTACTCGCTGTGGAAATTACACTTCGGAGGTAGACTTTGAAgcggtgttgtttattatgttgCACAAGATGCAGTGACAGTGTACCCTGTGAAATGAGGGCTCTTTCCCTCTGTTTTTGTGTGCCTTGTAAACATTAGTAAATAATTTTGTCCACTTTTAACTTTAATCTGATAATACGGCCGTTTTGagagaaaatgaaaatctgaTAAAATTAAGAACCATTGTGTTAATAGATAAATGACTATTcccgaggccttccaaggggtggtctggtgtcgctttgtcgctcttttacgactctgtctgtcgcttgtttcgttagggtcAAATGCgtcactgtcgcaaagaaaacagaggAATGGCAAGTGAATCGTCGCTGTCGCACGCTGTCGCACGCTGTCGCACTTTTTCTGCCAGGTTCtttcggttgtcggtgttttagCAGACGATGGTCcagttttcggagccatgtcgcctGTCGCTTCCACTCCTTGGAAAGCCTCATTCCCGtcttagttgttgttgttgttgttgtcgctgCTACGCGATGTAGTTTGTGGCCTGAGGAAAAGAATCGACAGCCCTTGTTCTTCAGTGAAGAATTTTATAATCGTCAGCCTACATTTGTATAAAATCGTTGTTTGCTGGGCAGAATGGCTGGCCTGCCAAAAATAAAATGAGTCGTCCATTTATTAATTCAATCAATTGAATGAACAGCaacaaaaatgaaattaatattaaattgcAATGAGACATGAAAAGAATTACAATGTAAATAGAAAAGGGTCGTTAGTGCGACAAAAATTGACGTCTTATCGCTCTTAtcactgtatttatttaataagtCATGATCTCATCGCAATAGACACATTGAActgaaacaaaacgaacaattatgtaaaaaatgtaaatgaacGAAGAAGAACGTGAAAGCAGTTTTATGAACTTGACGTTTGATAACCTCTTAAGGTCTACTGAACTGCTCTCGCAAGCTTCAAATCAACAAAACGAACACGAATCTGTACAGAGTTTAATGGCATGTTTACTATTGAGTGGTCACCTTAAGAAACCCATCAGAGATAACttcgttgtatcgcgctgcgtgttttgcacacttcgaagggattttgggtttttctattccgccaatcatctgattgggggcggggttatgcaaatagcccaatcagaacACGTTGCGCTATGATTTGCATAACCCCGGCCCCATTCAGATGAACAGGCGGCACAGAAActggaacaaaaaaaaattccgaaAACGCAcagcgcgatacaacgaatttggctgtaaaacgacaaagccatttaaaagcaaCTGTTCTCCGGCTGCGGGTTGATTAGGGAAGGAAAACGTTCTTAACCAATGAAAGGGTGCTGGGGCTTTTTTCAGCAGTCAAAACTTAATTGAGAACAGCTGTAAATAGGAAAGAACTAGCAAAATACTGGAAAATGACAACTTAGGTGTTTCAAATCATTCAGTAGCAACACTATTTGTACGTAGGTAAATTTGTAAATACTGTGCAAACAAACGTTGAAAGGGTCTTTGTAGATTGAATTATACTAGTTCAAAAGGTTGTAAATAAGGGGGAAAACAATCTCATCGAAAAATTGAAGAATCTGAGAGAAGTGTTTCTCAAGGTTGAATAAAAGACAACGAAAAACTGAACAGCA

Protein

Uniprot

Uniprot term	Description
P34295	Regulator of G-protein signaling rgs-1 OS=Caenorhabditis elegans OX=6239 GN=rgs-1 PE=2 SV=3
Q9PWA0	Regulator of G-protein signaling 17 OS=Gallus gallus OX=9031 GN=RGS17 PE=2 SV=1
P49795	Regulator of G-protein signaling 19 OS=Homo sapiens OX=9606 GN=RGS19 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00615	RGS	Regulator of G protein signaling domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR016137	Domain	RGS domain	Interproscan
IPR036305	Homologous_superfamily	RGS domain superfamily	Interproscan
IPR044926	Homologous_superfamily	RGS, subdomain 2	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10845	REGULATOR OF G PROTEIN SIGNALING	Interproscan

Gene Ontology

GO terms	Category	Description	Source
-	-	-	-

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K16449	RGS; regulator of G-protein signaling	-	Signaling proteins	-	deepkoala