Detailed information of pspe_0.1.m1.33833.m1 in Pachyseris speciosa

Genomic Location: Sc0000282:505190...507694
NR annotation: PFX13259.1, Pogo transposable element with KRAB domain [Stylophora pistillata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03221HTH_Tnp_Tc5Tc5 transposase DNA-binding domainDomainInterproscan
PF09607BrkDBDBrinker DNA-binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006600DomainHTH CenpB-type DNA-binding domainInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR018586DomainBrinker DNA-binding domainInterproscan
IPR050863FamilyCentromere and Transposable Element-Derived ProteinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19303TRANSPOSONInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan

TOP