Gene detail

Detailed information of pspe_0.1.m1.34275.m1 in Pachyseris speciosa

Genomic Location: Sc0000289:743451...749333
NR annotation: XP_020603731.1, uncharacterized skeletal organic matrix protein 5-like isoform X2 [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
B8VIU6	Uncharacterized skeletal organic matrix protein 5 OS=Acropora millepora OX=45264 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07645	EGF_CA	Calcium-binding EGF domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR049883	Domain	NOTCH1 EGF-like calcium-binding domain	Interproscan
IPR036056	Homologous_superfamily	Fibrinogen-like, C-terminal	Interproscan
IPR018097	Conserved_site	EGF-like calcium-binding, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR16146	INTELECTIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005615	Cellular Component	extracellular space	Interproscan
GO:0070492	Molecular Function	oligosaccharide binding	Interproscan
GO:0005509	Molecular Function	calcium ion binding	Interproscan