Detailed information of pspe_0.1.m1.34280.m1 in Pachyseris speciosa

Genomic Location: Sc0000289:725478...729059
NR annotation: XP_020603691.1, ficolin-1-like [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O00602Ficolin-1 OS=Homo sapiens OX=9606 GN=FCN1 PE=1 SV=2
Q15485Ficolin-2 OS=Homo sapiens OX=9606 GN=FCN2 PE=1 SV=2
O70497Ficolin-2 OS=Mus musculus OX=10090 GN=Fcn2 PE=2 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00147Fibrinogen_CFibrinogen beta and gamma chains, C-terminal globular domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002181DomainFibrinogen, alpha/beta/gamma chain, C-terminal globular domainInterproscan
IPR036056Homologous_superfamilyFibrinogen-like, C-terminalInterproscan
IPR050373FamilyFibrinogen C-terminal domain-containing proteinInterproscan
IPR014716Homologous_superfamilyFibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19143FIBRINOGEN/TENASCIN/ANGIOPOEITINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0062023Cellular Componentcollagen-containing extracellular matrixInterproscan

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