Gene detail

Detailed information of pspe_0.1.m1.34431.m1 in Pachyseris speciosa

Genomic Location: Sc0000292:322015...327365
NR annotation: CAH3127526.1, unnamed protein product [Pocillopora meandrina]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

pspe_0.1.m1.34431.m1

ATGTTGGGCCCGACATGTTGGACGTTTGAATACCGTGTTAGGAGTTGCTGGATCGATGTCGTTGTTATAACTGCCGGCAACACCCAACACGGTGTTCAAACACACCCAACGTGTTGTGCCACTGGAGCTGCAGCAGCAAGCACGGCAAATGACGAGGCAATGGATGAAAGATGCAAAAAGATACTGAAAAGTGTCAAGGTGGAGTTAGTGGAGGACATGAATGCGGAGGAAGTTTTGCTACACATGGCTAAAGAATTCGTGTTTAGTGAGCGGAACGAAGAAGAAATTAAGTCCAGGGGGTACCGTCAAGATAAATGCACAGCGCTGCTAGAAATATTACCAACGAGAGGTGCAAAAGCCTATGGTGCCTTCGTTAAAGCACTGGAAAAAGTTCATCCGCATCTTGCGAACATTGTTAGAAAAGCAGTCGAATCAGGAAAGCCATTTCCCTCAGGAGCTATGTTGTGCATTCTTATTAGAGAGAAAATTTTATCAAAAGCAGGAGCATATATATCGATAATTCATCTGATTTCTATTCTGGGTTTACAGAGGTATGCATGTGACTTGAACACCATGAATTCAATGAAAAAAAACCTTGACCTGAACCTGAACCTGAAGCTGACCGGAACTTAAACCTGAACCTGACAATACATTGGACGAAAAGATTACAGATGGACAGAAGAAGGTGTATTTCCGGaacaggcgtgcgtttctcactGACTACCGAGAACATTTCGCATCGGGTCCGAGGATtatttttttgtatgttttctGTAGACTGATTCTAGGTTTTTTGGCCTAGCCCGATGTGTTTCTCAGTTTCATAATGTACTTTCTAAAAAGGTATTTAACAATACTAGAAGTAGAATTTCTGGTACTGAACCTAATGCGCGCATAAGTTTTTCGCCGGTCCCGAAACGTTTCCGGGAGTTTCGAGAAAAGTACGCCAGCTTCGAATAAAAAATAGTCTTgactggccaaactatcgaacaaagttggattcaacgttccaactttgctcgatccaacatgggagcttaagcaacgacgacggcaacggcaacgaaaacgtcatttcaaaatctaacttctcgccTTATTAATTCTTTCGCGTTTATTCCACTTTGTCTAACTTGAAAATTGTTTtctgacgttctcgttgccgttcccgtcctcgttgcttcAGCTCCCTAAtttaccgtttggccgcccatgttggatgatgttcgtccaacaaCTTTTGCTCGAACAAGCGTTCGGATAGGATTTTCTTTTGATGAAACATAACACCCAACATTTATGTTCGACGAAATGTTGGAGTGTTTTGCCACTCTTCTaacaaagttgtatcctgaagcgagtcacgttcgccctgctagccaatcacaaaTCGCTATCCTATTTTCAAGCCTAGGCCTCTCGTGTCGTTTCCAACAAAgttttgcagatgtccggttcaatagcttttaaaatttctttgaaCTGATCCAGGCTCATTCTCATCCGCTCCTTGAACGCTGGTGTAACCTTTTCTGTtcgttctcttaaccattcccTGGTTTTTCCTCACTTGACACCGTCATTTGCGTCCTCGAACATCTTTATTACCACAAACGACTAGAGGCGCTTTTCGTTTTCGTTTAGGCGCTATGTTTTCAAATTTAGCACCGGTGActtgtttcgtctagcaattttggatagtgttttgcctTTATCTCAACGTTCACTTCTAATTAACCTTagttatcctgcgaaatcgcgcggaatattgCTTGATATTTTGTCCGGACGAAGTCGTAGCCCGAGTTGggtaaaatcaggcgatatccgcaagattgagcaagataattgttttatcattCAACACACTGATAATAAAGCACATTTTACTTAGTTTATTGCAGAAAAGCTGGATAAACCATCATCTTTCTCCGCGACATACGAAATAACGTATATTGCAGGACGAAAATCGAGAACGCCATGACCATattatttggacattgtcacaatgtgtcgaataataattaacaacaagaggctacaattagcctaaactcgggcttgcaaaaaacagtattgtatccctaatttagcgctaaacaaaagaatagagagaagtctgtctttcttacatcggactcATTGCGCTTTGCTTGTGGTGGAGTCTATTTGTTTGCAGTGTATGTCTgcagacccctatcagatcaacatatatccctttaaaattacaaaattgctttacagctcaaccattgacaacaataataatagcacttgtaaaaaataatcataaaagaagaagaaaaagccCGCAATAGGTGCCACAAGTAGAAGTAGAACCCGGGTTGTTTACATTAGGGGCaataacaatgacctctagaccactgagggtcagcatagctaatgaggtaaaaataggttatttattgcaaaaaaactaagcacttGTTTtggcttcgatgaatatttctgctaagtgtttgagaaaggaaacgcatATCAAACGaggtaggattttttcgcattgACGTTAAAgaagtctcggtgaaatgtgtggagaaaaagTAATCTGTtcacaaatacgtcatttgaaacattagaaagagagtaaggtttccgcggtcagtttcacgtcacgcaagtaaaaactaaaaccGCTTATTATTcgaaaactaatgtccagaaattgagatattgtggaaaaatagtaaataaagtacctgttaaagtctcaggggtgtatgatatcccgtacttgagttattcattaaaatgtac

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00619	CARD	Caspase recruitment domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001315	Domain	CARD domain	Interproscan
IPR011029	Homologous_superfamily	Death-like domain superfamily	Interproscan
IPR037939	Family	Death domain-containing protein CRADD	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15034	DEATH DOMAIN-CONTAINING PROTEIN CRADD	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0042981	Biological Process	regulation of apoptotic process	Interproscan
GO:0002020	Molecular Function	protease binding	Interproscan
GO:0070513	Molecular Function	death domain binding	Interproscan