Detailed information of pspe_0.1.m1.35115.m1 in Pachyseris speciosa

Genomic Location: Sc0000303:838275...842082
NR annotation: CAH3126728.1, unnamed protein product, partial [Porites lobata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q94887Neurexin-4 OS=Drosophila melanogaster OX=7227 GN=Nrx-IV PE=1 SV=2
Q3UQ28Peroxidasin homolog OS=Mus musculus OX=10090 GN=Pxdn PE=1 SV=2
D3YXG0Hemicentin-1 OS=Mus musculus OX=10090 GN=Hmcn1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01391CollagenCollagen triple helix repeat (20 copies)RepeatInterproscan
PF07679I-setImmunoglobulin I-set domainDomainInterproscan
PF13927Ig_3Immunoglobulin domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR007110DomainImmunoglobulin-like domainInterproscan
IPR008160RepeatCollagen triple helix repeatInterproscan
IPR003599DomainImmunoglobulin subtypeInterproscan
IPR036179Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR002181DomainFibrinogen, alpha/beta/gamma chain, C-terminal globular domainInterproscan
IPR013098DomainImmunoglobulin I-setInterproscan
IPR036056Homologous_superfamilyFibrinogen-like, C-terminalInterproscan
IPR051170FamilyNeural and epithelial cell adhesion domain-containing proteinInterproscan
IPR003598DomainImmunoglobulin subtype 2Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12231CTX-RELATED TYPE I TRANSMEMBRANE PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
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