Detailed information of pspe_0.1.m1.35230.m1 in Pachyseris speciosa

Genomic Location: Sc0000306:30862...62597
NR annotation: RMX37934.1, hypothetical protein pdam_00022375 [Pocillopora damicornis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
B3EWZ6MAM and LDL-receptor class A domain-containing protein 2 (Fragment) OS=Acropora millepora OX=45264 PE=1 SV=1
B3EWZ5MAM and LDL-receptor class A domain-containing protein 1 (Fragment) OS=Acropora millepora OX=45264 PE=1 SV=1
Q0WYX8MAM domain-containing glycosylphosphatidylinositol anchor protein 1 OS=Gallus gallus OX=9031 GN=MDGA1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00057Ldl_recept_aLow-density lipoprotein receptor domain class ARepeatInterproscan
PF13855LRR_8Leucine rich repeatRepeatInterproscan
PF00431CUBCUB domainDomainInterproscan
PF00629MAMMAM domain, meprin/A5/muDomainInterproscan
PF00040fn2Fibronectin type II domainDomainInterproscan
PF00354PentaxinPentaxin familyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036055Homologous_superfamilyLDL receptor-like superfamilyInterproscan
IPR002172RepeatLow-density lipoprotein (LDL) receptor class A repeatInterproscan
IPR013806Homologous_superfamilyKringle-like foldInterproscan
IPR000998DomainMAM domainInterproscan
IPR036943Homologous_superfamilyFibronectin type II domain superfamilyInterproscan
IPR032675Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR000859DomainCUB domainInterproscan
IPR001611RepeatLeucine-rich repeatInterproscan
IPR001759FamilyPentraxin-relatedInterproscan
IPR000562DomainFibronectin type II domainInterproscan
IPR051560FamilyMAM domain-containing proteinInterproscan
IPR035914Homologous_superfamilySpermadhesin, CUB domain superfamilyInterproscan
IPR003591RepeatLeucine-rich repeat, typical subtypeInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23282APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR.Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0016020Cellular ComponentmembraneInterproscan

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