Gene detail

Detailed information of pspe_0.1.m1.35350.m1 in Pachyseris speciosa

Genomic Location: Sc0000308:343807...348477
NR annotation: KAJ7355034.1, hypothetical protein OS493_028242 [Desmophyllum pertusum]

Gene Structure

More details in Jbrowse

Sequence

CDS

pspe_0.1.m1.35350.m1

ATGACATTTGACGAAATAATGGACAAAGTCAGAGACTATGTTCGTGAAAGGGGAATTATGATGGAGGACAAGTTTCACGAATATGATCCATTGAGAGAGGGCCATGTCAGCGTAAGTGACTTCTGGAAAGCTTGCAAGGAGATATTCCAAGAAATACTGACTGATGATCAAGTACAAGAAATCCAGTCCCATTATTGCCAAAAGGGCAAACCTACTTGCTGCGACTGGTCAAAGTTTCTACACGATGCTGAATCTGCAGGAACAGCTGCTGATAATCGGATCGGTAAATCCACCAAGAACCTCCAAAAGAAGGTGATATTAAAAAGAGTTGCCCAGTCGTTGAAGGGAAGAGCCGACATCACGAACTTGCTGGCGAAAGCCTCGTCGCGGGAACCCAATAGAAATACAATTGACGGTGATGCATTAGACACCCAATCAGACGAATTATTTCAGCTTCTTAGCGAGGTTACCGAAGAAGATGATCTAAAGATTATCGTGGACATTTACACAGACGGCATGGGTTTCAAATACCAAGAGTTTGTGCATGATTTGAAGGAAAGCCTCTCGTTATTAGAAAATCTTATGTTCTACACGATGCTGTGGTGCTTCCCAAATTTCATCAGCGAGATCGCTCCGAGGTGGATAACAATTGATGGTATCCGTGATGTTCACGTGCGAATTCACAGATTCGCTGGCATCTTCCTGATCGCCATTCCCTCCCTTGCCCACGTCCTTGTGATCTTTCTTCCGCCTCTCGTTGACGGTACGGCATTGAAATATTACCCTCCGAGTACGTTCAACTACAGTAGCTACCCGTGTCACTTGAACTGGACAAAGATCTGGGATCCTGCAGCCGTCCAGGACTGGACTTTCAACGACCACACCGGAGTCCACCTCACCTCCGACGAGATCTACCGCTTCCTGCTGATGATTGTCCTGTTCTGCATGTTCTTCCCCCTCAGCAGATCAAATTACGTTAACCAACGAAGCTACTCGCTGGCGATGACCTTGCACGTGTTTGCTGGGATCTGGTACGCTATTGACAACATTCGAAAGATCACTCACGGCTTGGCGCATGTTTTTAACCTGCCCATGCTCATCATCTGGTGTTTGGACCGGGTTATATCAATCTGGGTTTACCGACATCACCACGCTCGCGTTGTGCAAAAGAAAGTCATAGGCAACAACGAGTACGTCGTCTTGTATGTCAAACTCGACAAGGACGTGACACATGGCGTTGGCGATGTCTACTACCTCCATCACAAGGTGAAAGAGAGCTCAGGAATTGTACCGCAGCGATCGCACCCCTTCACCACCTTTGCAAATCTATCGCAAGACTCCACATGGGACATTGGTTTGGTTGTGTCGATAATGGAAGACGAAGAACAATTGTTCCTGCCTTGGACTAACTGGCTGGCCAAAGACAATACCGCTCTCACCCTGCACACGTGGGGGCCTTACCGTTCGTCGGTTTGGCAGCTCTACAACCAGCTAACTGAAGAGTCAGATGGGATGCAATCATCGACCCATTACGTTCTATTCGCAACAGGATCTGGATGCGGCTATGTTTTGGATGTCTTAAGCTGCCTGGCCCACAGAACACAACCATCCTTTCAACGAGGAGGCCAAAACTGCAAACGCGACAAGATTGAAGTTTTCTACTCCGTCCGATGCAAGGCATTTTACGAGTTTTTACGCAAACCAATCGATTATCTCTTGAAAGAGATCAAAGACAAGGACATTGCTGACATAAATTTCCAGTTTTACGTAACCAGTCCAGAAGACCTACAAAGGGAATCCGACAACGCAGAGTCTCAGATACAACTCATCAGTGGAAGAATAGATTTCGAAAAAGCTCTCCAGTCTGCCAATAAAAGTTCTCGCTGCTACTTTGTAGGAAGACCGGCCATCGCCGAAAGCGTTCAAAAAATATGCACGAGGAGGGGCATTACGCTGGTAAAAGATTACACCAACGGCCGAGGAGGAGAGGAAGACCGCCAATTATTGATTAAGTATCTAAAGATTAGCTTTTGGGttacattttttattgttgcCATTTGCGTTGCAACTGGTCTTTTGATCGACATTAGATCTATCAAGAGCAGCCTACAATCACATGGTTTGAATTTCACGGGCATGCGCATGTAA

Transcript

pspe_0.1.m1.35350.m1

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08030	NAD_binding_6	Ferric reductase NAD binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR050369	Family	Respiratory burst oxidase/Ferric reductase	Interproscan
IPR011992	Homologous_superfamily	EF-hand domain pair	Interproscan
IPR039261	Homologous_superfamily	Ferredoxin-NADP reductase (FNR), nucleotide-binding domain	Interproscan
IPR013121	Domain	Ferric reductase, NAD binding domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11972	NADPH OXIDASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0016491	Molecular Function	oxidoreductase activity	Interproscan