Gene detail

Detailed information of pspe_0.1.m1.35778.m1 in Pachyseris speciosa

Genomic Location: Sc0000315:201208...217784
NR annotation: CAH3178442.1, unnamed protein product [Porites evermanni]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

pspe_0.1.m1.35778.m1

AACCCCGGTAATTTTCAACGTTTGAGTGCGGCGGTCGCCATACGGAAATTACTACTGAGTTTAGTCAGTTCCACAACGCAGCAATTTTTGCCCTTACTAGGGTTACTGGAAGGAGTTTTAGAGCGCGGACCCGCAGAGCTAATAGCCATTTGCAATAACGTTCGTCAATTTCCTTTTCCTTCAATTTCGTATGCAAAGCCGAGCTTCTTCAATTAAAATGGGTCTGGACCCAAACCACCAAATGACCGAGGATGACATCCATGACTATCAGCTACCTGATGAGATTGGTTTCAAGTGGAAAGAGCTTGCAAGAAAGCTTCGCTACAAAGAAGCCAACATTAAGTCAATCGAAACGGAGAAAGGAAACTGCAACAAGGAATGCTGCATCGAGCTTCTTGTGGGATGGCTGGGCAGGGAGGGAAAAGACGCTACCGCTGGAAAACTAGCTGAGGCTTTAACAAGAATAGAGCTTAAGAATTTGGCTGACAGATTAATCAAATCAAACGATCAAAGCCAAttacgaaaaataaataaagaattggaagaTGCAAGACAACAGGGACAACAGGAAAGCGAGAATGCTGTTTCATTAGGCACTAAGGATGCCTCTGTTGTTTCGACGGACACGGATGAAGCCGCTAGAGAACTTCGCATTTGCAAAAGGTTGAAAAATCTCAACCAACAGCTCTACACCTATGTAACCTCTCAATTAGAGGTGCCTGAAGTGAAACATGATCTGTTGAAAACGCCAGTCAAATTGGATCTTTTGACAAGGCTCAGTGAGAGTTTGCAAGGACTTTACAGCGATATACAGTCCATGGTCACAGAGGCTTGCAAATGTAGCCAGGATGTAAAGAGAGACTTCTACGACTTTTCTTATCATGGGCTCCGAGCGGAACATAATGAATTAGTTCACCGAGTGGAGGATTTGGAATCTGCGTTAGATGAAATGTCCGAAGAGGAGAAGGAGAAGTTTAGCAGGCTTCAGAAATATCAAGCCAATCGACAAAGACAAGTCGGGCGATTAGAAAATATGTGGAGAAGTCTTTTCTCCCCGCCTGAACGGCTTCCCAAAACTCCATGGTCAGACACTACTGGAATCTGTGACAAGTCCAAGGAAAGTAAAAAGGTTTCAAGGCACACAGACCCTGGTGCCAGGCCAAAGCAAACGAAACCTTGCGACGTACGCACAAAGTCTGTAGCACCATACAAGGCTTTTGTATCGtttaaaAAGAGAACTCCACTGACAAGAAAATTTGGTCGAAGAAAGGATAAAGACGAAGATGCGTGCACTCTTGTTTCTTGTTCTGTAATGCGGGACCCCTGAAAGAAAGAACACAAGGAAGTTCTTAGTTATTTTTGAAACTAAGTACTTACTGCCTAGTGGGAAGTATTGTGGGAAGATTGAAAGCCTGAAGGAGTGAAGTCGACGTCGTAGACATACGTTTACGTATTCATGAGTTTTAGAAAGGTCGGGTATCGCCTGATAGACTAGTTCAATGAGATCAATCGGCTTGGTAGCCACACTTTGCTTTTATTCAgtgtaaattttactttaattttatgACAATCGGTAAAAGATAGATTCGTCGTGCATACGTTTTCTTAAGAGAAGTAACAAGAGTATAGAAACCGCTAGagttaattttcttttaccgcTTACGCGAAACTGCTCAGACCCGTTTCAAATTAAACGTCGCGTTACTGCCCTGCTTAGCTGGCTCCACTGTCGCACGACTTCAGCACGACTGTAGCACGatttggtttcaaacgtcgtgctactgccaaATTTAATTCGATCAATTGAGTTCGACATCGCAGttgcacgacgtttgaaacaaagtcgtgctactgccgtttAGCACGGCAACATTACATTTAATCGTTATTTAAAGGTGAAATGCATGTTAATGATTTTTAATAGCAGCAACAACAACGGAGTGTAAGTTTCTTCAATCAACATTTTTCAATCAAAAATACTAGCTAATACTTGTTCTCCTCTAACAGTATAACGCTGATCAAGGAGGGTCAATAGCTAAAAATAAGCATACCaataaaaacagaca

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00531	Death	Death domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000488	Domain	Death domain	Interproscan
IPR011029	Homologous_superfamily	Death-like domain superfamily	Interproscan
IPR016729	Domain	FADD, death domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15077	FAS-ASSOCIATING DEATH DOMAIN-CONTAINING PROTEIN FADD	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0007165	Biological Process	signal transduction	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K16732	PRC1, ASE1, MAP65; Ase1/PRC1/MAP65 family protein	-	Cytoskeleton proteins	ko04812	deepkoala