Detailed information of pspe_0.1.m1.35849.m1 in Pachyseris speciosa

Genomic Location: Sc0000316:255678...268317
NR annotation: XP_020627225.1, UV excision repair protein RAD23 homolog A-like isoform X2 [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
A3KMV2UV excision repair protein RAD23 homolog A OS=Bos taurus OX=9913 GN=RAD23A PE=2 SV=1
P54725UV excision repair protein RAD23 homolog A OS=Homo sapiens OX=9606 GN=RAD23A PE=1 SV=1
P54726UV excision repair protein RAD23 homolog A OS=Mus musculus OX=10090 GN=Rad23a PE=1 SV=2
Gene familySubfamily
Ubiquitin FamilyUBD|Alpha-Helix|UBA

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00627UBAUBA/TS-N domainDomainInterproscan
PF09280XPC-bindingXPC-binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR015940DomainUbiquitin-associated domainInterproscan
IPR015360DomainXPC-binding domainInterproscan
IPR036353Homologous_superfamilyXPC-binding domain superfamilyInterproscan
IPR009060Homologous_superfamilyUBA-like superfamilyInterproscan
IPR004806FamilyUV excision repair protein Rad23Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10621UV EXCISION REPAIR PROTEIN RAD23Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003684Molecular Functiondamaged DNA bindingInterproscan
GO:0006289Biological Processnucleotide-excision repairInterproscan
GO:0043161Biological Processproteasome-mediated ubiquitin-dependent protein catabolic processInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005654Cellular ComponentnucleoplasmInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0031593Molecular Functionpolyubiquitin modification-dependent protein bindingInterproscan
GO:0043130Molecular Functionubiquitin bindingInterproscan
GO:0070628Molecular Functionproteasome bindingInterproscan

TOP