Gene detail

Detailed information of pspe_0.1.m1.36408.m1 in Pachyseris speciosa

Genomic Location: Sc0000325:297436...306820
NR annotation: XP_015776249.1, PREDICTED: 50S ribosomal protein L1-like [Acropora digitifera]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
A6W3A2	Large ribosomal subunit protein uL1 OS=Marinomonas sp. (strain MWYL1) OX=400668 GN=rplA PE=3 SV=1
Q03E49	Large ribosomal subunit protein uL1 OS=Pediococcus pentosaceus (strain ATCC 25745 / CCUG 21536 / LMG 10740 / 183-1w) OX=278197 GN=rplA PE=3 SV=1
Q2GJ65	Large ribosomal subunit protein uL1 OS=Anaplasma phagocytophilum (strain HZ) OX=212042 GN=rplA PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00687	Ribosomal_L1	Ribosomal protein L1p/L10e family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR028364	Family	Ribosomal protein uL1/ribosomal biogenesis protein	Interproscan
IPR016095	Homologous_superfamily	Large ribosomal subunit protein uL1, 3-layer alpha/beta-sandwich domain	Interproscan
IPR002143	Family	Large ribosomal subunit protein uL1	Interproscan
IPR023674	Homologous_superfamily	Ribosomal protein uL1-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR36427	54S RIBOSOMAL PROTEIN L1, MITOCHONDRIAL	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0003735	Molecular Function	structural constituent of ribosome	Interproscan
GO:0006412	Biological Process	translation	Interproscan
GO:0015934	Cellular Component	large ribosomal subunit	Interproscan