Detailed information of pspe_0.1.m1.36638.m1 in Pachyseris speciosa

Genomic Location: Sc0000329:525061...535975
NR annotation: XP_015751048.1, PREDICTED: LIM and SH3 domain protein 1-like [Acropora digitifera]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q3B7M5LIM and SH3 domain protein 1 OS=Bos taurus OX=9913 GN=LASP1 PE=2 SV=1
Q14847LIM and SH3 domain protein 1 OS=Homo sapiens OX=9606 GN=LASP1 PE=1 SV=2
Q5R5W0LIM and SH3 domain protein 1 OS=Pongo abelii OX=9601 GN=LASP1 PE=2 SV=1
Gene familySubfamily
Ubiquitin FamilyUBD|Other|SH3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00412LIMLIM domainDomainInterproscan
PF00018SH3_1SH3 domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001781DomainZinc finger, LIM-typeInterproscan
IPR001452DomainSH3 domainInterproscan
IPR000900RepeatNebulin repeatInterproscan
IPR036028Homologous_superfamilySH3-like domain superfamilyInterproscan
IPR051759FamilyLIM and SH3 domain-containing proteinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46218LASPInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005925Cellular Componentfocal adhesionInterproscan
GO:0051015Molecular Functionactin filament bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K24420LASP1; LIM and SH3 domain protein 1-Domain-containing proteins not elsewhere classifiedko04990deepkoala

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