Detailed information of pspe_0.1.m1.37048.m1 in Pachyseris speciosa

Genomic Location: Sc0000336:773602...841225
NR annotation: XP_044178274.1, uncharacterized protein LOC114957554 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
B3EWZ5MAM and LDL-receptor class A domain-containing protein 1 (Fragment) OS=Acropora millepora OX=45264 PE=1 SV=1
B3EWZ6MAM and LDL-receptor class A domain-containing protein 2 (Fragment) OS=Acropora millepora OX=45264 PE=1 SV=1
Q61398Procollagen C-endopeptidase enhancer 1 OS=Mus musculus OX=10090 GN=Pcolce PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00057Ldl_recept_aLow-density lipoprotein receptor domain class ARepeatInterproscan
PF00059Lectin_CLectin C-type domainDomainInterproscan
PF00629MAMMAM domain, meprin/A5/muDomainInterproscan
PF13385Laminin_G_3Concanavalin A-like lectin/glucanases superfamilyDomainInterproscan
PF07691PA14PA14 domainDomainInterproscan
PF00431CUBCUB domainDomainInterproscan
PF13855LRR_8Leucine rich repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002172RepeatLow-density lipoprotein (LDL) receptor class A repeatInterproscan
IPR037524DomainPA14/GLEYA domainInterproscan
IPR001611RepeatLeucine-rich repeatInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR000998DomainMAM domainInterproscan
IPR036055Homologous_superfamilyLDL receptor-like superfamilyInterproscan
IPR001304DomainC-type lectin-likeInterproscan
IPR000859DomainCUB domainInterproscan
IPR001759FamilyPentraxin-relatedInterproscan
IPR023415Conserved_siteLow-density lipoprotein (LDL) receptor class A, conserved siteInterproscan
IPR008979Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan
IPR003591RepeatLeucine-rich repeat, typical subtypeInterproscan
IPR016186Homologous_superfamilyC-type lectin-like/link domain superfamilyInterproscan
IPR011658DomainPA14 domainInterproscan
IPR016187Homologous_superfamilyC-type lectin foldInterproscan
IPR032675Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR035914Homologous_superfamilySpermadhesin, CUB domain superfamilyInterproscan
IPR051560FamilyMAM domain-containing proteinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23282APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR.Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0016020Cellular ComponentmembraneInterproscan

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