Gene detail

Detailed information of pspe_0.1.m1.39048.m1 in Pachyseris speciosa

Genomic Location: Sc0000372:72283...96263
NR annotation: CAH3110073.1, unnamed protein product [Porites lobata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

pspe_0.1.m1.39048.m1

GTTTCATCAGCTGAACGGAAACGGATGGATAGATGCAACCTTGGTGGTTCGTTGCGCACCGTACGGCCAGAAAAAACACTAAACTTTGTGTGAAAGTAGCCTGTTTTAGTGGCGTTTAACAACAAGATGTAAATAAAGAAAGATGTAATTCGGCTTCTCCGTTGCACTGACACAATGTTCCGTTCCTCGCGGCTGCTACAAATCACGGCGTTGCTTGCGCTGACATTTGGCGCTGGGACTTTGTTATTCTTTACCGCGGGATATTTCAGAAGAAAGCGTCGGGAACCATCAACTGGCAAGAGCTCTTCTTACAATGATCGCCCGTTGAGAAGAACGAAAACCGTTACGTCAGGTAGCACAAGAGTTTCTGTCGGTGAATCATCCAGACCAAACTTTAAGTGTGCTGGCTTACAACAGGAGCTTATTTTTCGACGCCAAGCGTCGAGTGTTAGATCTCAACCTGGAAATGTGGATGACATCACCATAACTGTGAATGATGGAAGGATTTCTGAAGACAGTGCTGTTGACTTAGGAGAGATAATTGCAGATGAAGAGGAGATCATAGAAGAACTCATTAAGAGAGGTGTGGAGAGCTTTGAAACAGCATTAGAACACTGGTATGAAGCTGCTGAATATGTGATGACACGACAAGCACAAAGCAGTCCACAGGAGGAGAATTCACTTTTCATTTTTGAAGCTGATGCAAAACTTAGTGCTTTGATTGGTAGCTCAAGAAAGCTGCGTAGAGTCATTGAACAGAATGATCTTGCTGTGACAACTCTTCCGCACACACCAAGTAACATGTTGACATGGATTGATGATGAAAGTCTTCAGGAGCAGTTACAGCGGGAAATGAATAGAGACCTGGATGAGGATAATTCTTCCGACACAGAGTCATTTGTATCAGCATCTGATAATGCACAACTAGAGTTTGATGATATCACTGATGAGAGACTTGTGAATGAGTCGTACAGACTAAAGCTGTTTAGAGAAGCTGTACTGAGCACAGCTGGCAGTCACAGCCACCTGGAATTTTATGTGTCAGGCTTGCAGCATTACATTTGTCATGGAATTCTTTGCCGAAAGATGAGAACCAGTGTTGTAGGATGTGAAAGTGACATGGAGTTCCTTGCAAAAGTACACTGCATTCGCCAGGCCTCCGAGGACCCATCTGATTTTCAAGCTGCGTTTGATGAATTGGTGGAGTACACATCATCAACTGACAACTGGAAGCAAATTAAGGATGAACTCACTGGCCGAGGGGTGACCCACCTGTCATTCTATGATTTGCTGTTGGACTTTGTACTGTTGGATGCATTTGATGACCTAGAGACCCCACCCTACTCAGTAGCAACTGCTGTTCAGAACAGATGGCTGTCAGCACGCATCAAAGAGACTGCTCTTACAACAGCTATCTGGGGAGTACTGAAGGCCAAGACTTCTTATCTCCAGGATCCTTATGGCTTCATGGCGCACTTCTATGTTGTGGCTCAGTATGTATCTCCTGTTCTTGCTTGGGGATTCATGGGAACAGATGAAGAATTGAAGCAAGTGTGCGAGTATTTCAAGAGTCACATCCTTGGCTATATTAAAGACTTGTTCGACTTCAACACTTCTGATTATTCATCTGTTGAAAGTTTGTGTAAGTCCATCGTCAGACTAGCCAAGGAGAGAGGGGAACTGTTATCAAGAACTCGTGTTGGTGAAACAGACACAGACATTCTGAAAACCGCAGATTCCAATGGTGAAATGCAGAGTGCCACCATTCCACTTCAACGAGTCGAACAGTGTTAAAGGCATTATTCACTCTGAACTTTGGCGTGCTAATTTATGTTGGTGCACGTTTTGCACGAATTTCATTGATGAAACAGAGCGCGGCCATCATAGAAGGCCAAGAAGTTGAAAAAATGTAGGAGTTAGTACGTTACGTCAATCCCGGCGTGgagattttaatttattgaatgaaCGCCAGACAGAACGGCCTAACTTGCGTTGTATATTTTATTGTGCAAAGATTTGGGAACTTCGTAATAGTGTGACGTTTCCAGTGATTATTTTTACATTTGGCGATTTAATTTGAGGGTTAAAAAGAGCCACAAACAAAGAATCCGCCTgaagataagtttttttttggagACCGCTTTGGACTTTTCCTTGATGTTCCTATTTTGAAcggaaatctctgtaaaatgaaGTTTTCTTGTATTAAAAATTACTGTTGGAAACA

Protein

Uniprot

Uniprot term	Description
Q5XJS0	Mitoguardin 1 OS=Danio rerio OX=7955 GN=miga1 PE=2 SV=1
Q6GR21	Mitoguardin 2 OS=Xenopus laevis OX=8355 GN=miga2 PE=2 SV=1
Q8BK03	Mitoguardin 2 OS=Mus musculus OX=10090 GN=Miga2 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF10265	Miga	Mitoguardin	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR019392	Family	Mitoguardin	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21508	MITOGUARDIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0008053	Biological Process	mitochondrial fusion	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K27289	MIGA, FAM73; mitoguardin	-	Mitochondrial biogenesis	ko03029	deepkoala