Detailed information of pspe_0.1.m1.39088.m1 in Pachyseris speciosa

Genomic Location: Sc0000373:47865...60310
NR annotation: CAH3189434.1, unnamed protein product, partial [Porites evermanni]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF09093Lyase_catalytLyase, catalyticRepeatInterproscan
PF02278Lyase_8Polysaccharide lyase family 8, super-sandwich domainFamilyInterproscan
PF09092Lyase_NLyase, N terminalDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR015177DomainLyase, catalyticInterproscan
IPR039174FamilyChondroitin sulfate ABC lyaseInterproscan
IPR011013Homologous_superfamilyGalactose mutarotase-like domain superfamilyInterproscan
IPR014718Homologous_superfamilyGlycoside hydrolase-type carbohydrate-bindingInterproscan
IPR008929Homologous_superfamilyChondroitin AC/alginate lyaseInterproscan
IPR003159DomainPolysaccharide lyase family 8, central domainInterproscan
IPR008979Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan
IPR015176DomainLyase, N-terminalInterproscan
IPR011071Homologous_superfamilyPolysaccharide lyase family 8-like, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR37322-Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0006027Biological Processglycosaminoglycan catabolic processInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0005975Biological Processcarbohydrate metabolic processInterproscan
GO:0030246Molecular Functioncarbohydrate bindingInterproscan
GO:0005576Cellular Componentextracellular regionInterproscan
GO:0016829Molecular Functionlyase activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K08961K08961; chondroitin-sulfate-ABC endolyase/exolyaseEC:4.2.2.20
EC:4.2.2.21
Enzymes with EC numbers-deepkoala

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