Detailed information of pspe_0.1.m1.39170.m1 in Pachyseris speciosa

Genomic Location: Sc0000374:342154...363430
NR annotation: KAJ7334378.1, hypothetical protein OS493_014689 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O09118Netrin-1 OS=Mus musculus OX=10090 GN=Ntn1 PE=1 SV=3
Q924Z9Netrin-1 OS=Rattus norvegicus OX=10116 GN=Ntn1 PE=1 SV=1
O75445Usherin OS=Homo sapiens OX=9606 GN=USH2A PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00053Laminin_EGFLaminin EGF domainDomainInterproscan
PF00052Laminin_BLaminin B (Domain IV)DomainInterproscan
PF00055Laminin_NLaminin N-terminal (Domain VI)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR008211DomainLaminin, N-terminalInterproscan
IPR002049DomainLaminin-type EGF domainInterproscan
IPR013015DomainLaminin IV type BInterproscan
IPR050440FamilyLaminin/Netrin Extracellular MatrixInterproscan
IPR000034DomainLaminin IVInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10574NETRIN/LAMININ-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005201Molecular Functionextracellular matrix structural constituentInterproscan
GO:0005604Cellular Componentbasement membraneInterproscan
GO:0009887Biological Processanimal organ morphogenesisInterproscan
GO:0009888Biological Processtissue developmentInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K05636LAMB1; laminin, beta 1-Toxoplasmosisko05145deepkoala

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