Detailed information of pspe_0.1.m1.39422.m1 in Pachyseris speciosa

Genomic Location: Sc0000379:17859...28236
NR annotation: CAH3192852.1, unnamed protein product, partial [Porites evermanni]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P35067Histone H2B OS=Acropora formosa OX=126732 PE=3 SV=1
P35059Histone H4 OS=Acropora formosa OX=126732 PE=3 SV=2
Q6LAF1Histone H4 OS=Dendronephthya klunzingeri OX=84964 GN=H4DEKL PE=3 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05699Dimer_Tnp_hAThAT family C-terminal dimerisation regionDomainInterproscan
PF12012DUF3504Domain of unknown function (DUF3504)FamilyInterproscan
PF00125HistoneCore histone H2A/H2B/H3/H4DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000558FamilyHistone H2BInterproscan
IPR001951FamilyHistone H4Interproscan
IPR008906DomainHAT, C-terminal dimerisation domainInterproscan
IPR009072Homologous_superfamilyHistone-foldInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR013762Homologous_superfamilyIntegrase-like, catalytic domain superfamilyInterproscan
IPR021893DomainDomain of unknown function DUF3504Interproscan
IPR019809Conserved_siteHistone H4, conserved siteInterproscan
IPR011010Homologous_superfamilyDNA breaking-rejoining enzyme, catalytic coreInterproscan
IPR007125DomainHistone H2A/H2B/H3Interproscan
IPR002104DomainIntegrase, catalytic domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46880RAS-ASSOCIATING DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000786Cellular ComponentnucleosomeInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0030527Molecular Functionstructural constituent of chromatinInterproscan
GO:0046983Molecular Functionprotein dimerization activityInterproscan
GO:0046982Molecular Functionprotein heterodimerization activityInterproscan
GO:0006310Biological ProcessDNA recombinationInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan

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