Detailed information of pspe_0.1.m1.39627.m1 in Pachyseris speciosa

Genomic Location: Sc0000382:546913...560491
NR annotation: XP_029192059.2, E3 SUMO-protein ligase ZBED1-like [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O75132Zinc finger BED domain-containing protein 4 OS=Homo sapiens OX=9606 GN=ZBED4 PE=1 SV=2
Q80WQ9Zinc finger BED domain-containing protein 4 OS=Mus musculus OX=10090 GN=Zbed4 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02892zf-BEDBED zinc fingerDomainInterproscan
PF05699Dimer_Tnp_hAThAT family C-terminal dimerisation regionDomainInterproscan
PF00096zf-C2H2Zinc finger, C2H2 typeDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR003656DomainZinc finger, BED-typeInterproscan
IPR036236Homologous_superfamilyZinc finger C2H2 superfamilyInterproscan
IPR008906DomainHAT, C-terminal dimerisation domainInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR052035FamilyZinc finger BED domain-containingInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46481ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0046983Molecular Functionprotein dimerization activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K24637ZBED1; zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1)EC:2.3.2.-
Ubiquitin systemko04121deepkoala

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