Gene detail

Detailed information of pspe_0.1.m1.39643.m1 in Pachyseris speciosa

Genomic Location: Sc0000382:695313...700432
NR annotation: XP_022779926.1, uncharacterized protein LOC111321343 [Stylophora pistillata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

pspe_0.1.m1.39643.m1

atgtttacaaatattatctataaGTTCACTGAAGCCGAGAAAGCCAAGCGTCACCCTTATACATTCATGCCGTTTGGTCATGGTCCTCACAACTGTGTCGGCATGAGATTTGCCTTGTTGGAAGTTAAACTGACACTGGTTAAACTATTGAAGAAGTACAAGCTAGAACGTACCGAGAAAACAGCGGTTCCGTTAGGTTTTACAATTGGTTCTACTCTTTCTTGTCCTCAAGGAAAAATCATGCTCAGGCTTTCACCGCGGGAGTAAAACGAAAGTTTGTGTTAATGATTGTTTAGACTGAGCACGAGAAATCTTCAGGAGAACTAACTTTGTATATTTATTTGTAGTGcgaaactagatagacagatagaTCAACTTTATTTCAACACGCCTTCCTATTCAACATCAACAGAAGCCACTCAGGTGGTTCACACCGGTTTTTAGCACTttcactttgatggatcattactaccattctttaaacgttgttaccttcatagtcgtatcaaacaaatgcccaatcattgctGAACAAGTTATGATAAATTTTctgcttaaccctttcactcccacaccggccaaaactggccgtgCAGAACCACCTCCCtcgtaccacttgtgacgtcatcagttttagcgctcgcagacaactttaccatgtaacatgtgtaggtagaagagatctttcaaaccatacccaatgagcacgattccgtcaaactggccggagaaaacacaagaaaaccaagtgacgttgacccgaaaattgaaaagaaaatcttgttccactacccacgtgcacttccttccatctaatcctacgatccgaaaagttttccccaaatcttttcccaccgaaaggaagcccagaaaatgcccagcaagagagaaagaaggtgaggcaagaaaagcaaaagaaaaagggaggagagaaaacaaaaggtagaaggagatGGGGCGGGGAAACtttttcaacccaaaaaatctgcgcatgcccaaactttgaaagctcaaatgaaggatcaggaacagaaggacgccaggagctctaccaggaaacagagtttcaggcagttttggttctttttggctagactttgaccagaaaacggctcgacaagcttcaaaaggtgttttttggtaaaatgttcaggagccaaagggtCAATAGGTAACCATAGGAACACAGTAACCTTCAGAAACACCCCTAACTTTGGCTTCAAgcgataataaataaaaaacgagTTCAATGACGCCACGCCCATTTCTTATTGTTGAAAAGTCAGAAGGGTGTCTAGATCCAAGTTTTTGCAAAGTTCAAAAAAAATATAGGGgcgattcagagccaccttaaatttttgaaCGAGGTCGTATTCGAAGCTCTCTGACCATAAATTCTTATACGGCGTGTCGTTCTAAAGAGTGAGACAGGGATTATGGAGGAACTACGTAAGCTGAAACGAGCCCCAAGACACGGACCAAAAACGTTCTGTAAAACTAGACAACAAACCTAAGGATTACCATAAGAGTGTACAGCCGAGTTATTTTTCATTCAATCCTGTCGTTCAGGTGTATACTCTGTTGTTTGCGTTTTTCGAGGTGGTGTTATCAACTGAACTAGAAGTTGCTGCACAGAGTTCTAGGCCAAGTGCTATTAAGAACCTGCAATGTAGCTGCAACGCTCGACAAGAAAGATTTGACAAGATTTTGGACTCTGATGATAGAAATAATTGGAAATTCCGTAAAAAGTAAGTTGGTTATTGCCGTGGGCATATTAAATGTGTCTAAGTACTTAGGAGTCACAAGACAACttccaaaatatatttttcacaGAAAAGAGGTGCCTACAAACACATATGAAGAACTGCAACTGCTGGAACGATTACATTTTATCGACTTGACGCAATGAATGTAGAACATAGATAGCAATGGCGTTTATTTCTTTGCTACTGTATAACATCGAGCTTAACCTTAAGATGCGTTTACATTTGTTTCCTTACATGCCCACTCTGACCGAATCAATTCAACTCACTGTAATTAACCTGTGAACACTAAAAGACGAAATAAAATGTCGACCATTGTCAT

Protein

Uniprot

Uniprot term	Description
P79401	Cytochrome P450 3A29 OS=Sus scrofa OX=9823 GN=CYP3A29 PE=2 SV=1
O70537	Cytochrome P450 3A31 OS=Mesocricetus auratus OX=10036 GN=CYP3A31 PE=2 SV=1
Q64581	Cytochrome P450 3A18 OS=Rattus norvegicus OX=10116 GN=Cyp3a18 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00067	p450	Cytochrome P450	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001128	Family	Cytochrome P450	Interproscan
IPR017972	Conserved_site	Cytochrome P450, conserved site	Interproscan
IPR002403	Family	Cytochrome P450, E-class, group IV	Interproscan
IPR036396	Homologous_superfamily	Cytochrome P450 superfamily	Interproscan
IPR050705	Family	Cytochrome P450 3A	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24302	CYTOCHROME P450 FAMILY 3	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004497	Molecular Function	monooxygenase activity	Interproscan
GO:0005506	Molecular Function	iron ion binding	Interproscan
GO:0016705	Molecular Function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	Interproscan
GO:0020037	Molecular Function	heme binding	Interproscan
GO:0008395	Molecular Function	steroid hydroxylase activity	Interproscan