Detailed information of pspe_0.1.m1.39647.m1 in Pachyseris speciosa

Genomic Location: Sc0000383:28054...72045
NR annotation: XP_044181887.1, vacuolar protein sorting-associated protein 11 homolog isoform X1 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q91W86Vacuolar protein sorting-associated protein 11 homolog OS=Mus musculus OX=10090 GN=Vps11 PE=1 SV=3
Q9H270Vacuolar protein sorting-associated protein 11 homolog OS=Homo sapiens OX=9606 GN=VPS11 PE=1 SV=1
Q54YP4Vacuolar protein sorting-associated protein 11 homolog OS=Dictyostelium discoideum OX=44689 GN=vps11 PE=3 SV=1
Gene familySubfamily
Ubiquitin FamilyDUB|ULP|ULP

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00637ClathrinRegion in Clathrin and VPSRepeatInterproscan
PF12451VPS11_CVacuolar protein sorting protein 11 C terminalFamilyInterproscan
PF13923zf-C3HC4_2Zinc finger, C3HC4 type (RING finger)DomainInterproscan
PF09588YqaJYqaJ-like viral recombinase domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000547RepeatClathrin, heavy chain/VPS, 7-fold repeatInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR024763DomainVacuolar protein sorting protein 11, C-terminalInterproscan
IPR036361Homologous_superfamilySAP domain superfamilyInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR007527DomainZinc finger, SWIM-typeInterproscan
IPR011335Homologous_superfamilyRestriction endonuclease type II-likeInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR038765Homologous_superfamilyPapain-like cysteine peptidase superfamilyInterproscan
IPR019080DomainYqaJ viral recombinaseInterproscan
IPR011604Homologous_superfamilyPD-(D/E)XK endonuclease-like domain superfamilyInterproscan
IPR003653DomainUlp1 protease family, C-terminal catalytic domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23323VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0006886Biological Processintracellular protein transportInterproscan
GO:0016192Biological Processvesicle-mediated transportInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005768Cellular ComponentendosomeInterproscan
GO:0006904Biological Processvesicle docking involved in exocytosisInterproscan
GO:0007032Biological Processendosome organizationInterproscan
GO:0007033Biological Processvacuole organizationInterproscan
GO:0030674Molecular Functionprotein-macromolecule adaptor activityInterproscan
GO:0030897Cellular ComponentHOPS complexInterproscan
GO:0048284Biological Processorganelle fusionInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0008234Molecular Functioncysteine-type peptidase activityInterproscan

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