Gene detail

Detailed information of pspe_0.1.m1.39874.m1 in Pachyseris speciosa

Genomic Location: Sc0000387:564275...593285
NR annotation: XP_022810028.1, histone-arginine methyltransferase CARMER-like [Stylophora pistillata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

pspe_0.1.m1.39874.m1

GCGATACATTCTTGTTTGCGATTCCGCAtaaaatgatgaagaaatataaaattcaGTGACAATTGCACGTGGATATCGGTTGTTTTCCAAGTTTATCGGTCTCCTCCACGTAATTTTAATGGACCAACCAATGAATGCTAGAAAAGAGACCAAGTCACAGTCTTTTCGGAACTGTAAGCTTCGGATTGTCAAAGGAGACCACTCGCTTTCCACGCAAGATGGGGGAGACTGTGTCGTGGATGTTTACGACGATGCAAACAGTTCGCTTGAGATTCGCATACGTAGTGGCAACCAATATATGCCAAGCTTTAAAGTGACGAGGAACACAGATCATTGCCAAATGGGACGGCTGAGGTATCTCATCGACCTACCAGAGCATAACTTTAGCGTTGTGCTGAGCTTCACACATAGAGAAGATGTTGTTGACTTTAAAGAGCTGTTAAACACTGCCACTGGTAGGATGAAAAAACGTTCCATTTTCAATGAAAGGACAGAAAAGGCTTCAGCCAGTCAATATTTTCAGttttatggGTATTTATCACAGCAGCAGAACATGATGCAGGATTTTGTCAGGACATCAACCTACCAAAGAGCAATGCTTCAGAATCACTCAGATTTTCAGGACAAGGTTGTGATTGATGTTGGAGCTGGGTCAGgaattttatcattttttgctGTACAAGCAGGAGCTAAAAAAGTGTACGCTGTAGAAGCCAGCTCAATGGTCACACATGCTGAGGCTTTAGTCAAGCAAAATAACCTTTCTGGTAAAGTCATCATAATTCCTGGAAAAGTCGAGGAGGTTGAAATACCTGAGATGGTGGATGTCATTATCTCGGAGCCCATGGGTTACATGCTATACAATGAAAGAATGCTTGAAAGTTATCTGCACGCAAAGAAGTGGCTGAAACCTAATGGTAAAATGTTCCCCACCTTGGGAGACCTACATGTTGCTCCGTTTTTTGACGATGCGCTTTACATGGAACACTTCTCAAAAGCAAACTTCTGGTATCAAAATTCATTCTATGGAGTTGACTTGTCCAATCTCAGGGAGCCTGCCTTGGAGGAGTACTTTAGACAACCAATTGTTGATACATTTGATGTCCGGATTCTGATGGCCAAACCTGTGACACACACTGTAGACTTCCTTACTGCTGCAGAAGAAGATTTGCACAGGATAGAAATCCCTCTACACTTCACAGTACACACGGCAGGAACTGTTCACGGCCTTGCTTTCTGGTTTGATGTCTTATTTAAAGGAACCAATGTCCCAGTATGGCTGTCCACAGCCCCACAAGAGCCCCTTACGCACTGGTATCAGGTTCGATGTCTGCTTCCAACTCCAATATTTGTAAAGGTAGGAGAGTCGCTGTCTGGAAAAGTACTTCTCATCTCAAACAGAAGGCAAAGCTATGATGTTGAAATAGAAGTTTCAGTGGATGGAACAGGTGTCAAATCAAAAAACACTCTTGATCTCAAAAATCCTTACTTCCGCTACACTGGCTCCCAAACAACGGTACCTGCAGGCACCAGCACAATGTCGCCAACTGAACTGTACTGGAACATGACTACTTCAACTGCATCTGGTGTTAATGAGAATGGTTTGGAGGGTTCGTGTGGTAGTATTATGGGCAGTGGACTAGTTGTCAATGAAGTTGGGGGGCATCCTAGGTGCCACACCCTATGCCCTTGGGGTATCCCAAGTGGACTGCCCATAGTTAGTGCTGTTCCCAATGCCTCAACTCTAGAAGGAGGCTCTAGTCATTATGTCAGCAGCAGATACGTGGTTGGAAACCAAGCAGCTATCATTCAAGGCTACACTGGAGCTGGCTGTGGGGAATATGCCAATAGTAAAGGTGCTTATCACTCTGTGGTGTACTCAAGATGAAGTGGTGATGTTCTTTTCACTGCTAACAGTGCGCAAAATAACACACTCTGTACTCCATATGGTAATAAGATTTTGAACACAGCAAAACAATAAGATACTGGTTGACAGCTCACATTTCAATGGTCAGACTTGAGGATTTTGTCCACTGTCTGAAGCAGGGCTACCTTGTACAGCACGAGAAAAGCGTACCAGGAAATTActactcaatagctttcaaagaAAGACCCCCTTTCTTGTCGAATAAAAGGTTGATGCATATCTACTGTGACTGCAAACATCTGTAGAGTCCCTGCAGGTCTACAAGGTGCTGATGTATCATTTACTCAAGAATGCACAAAAGAAGATTTGCCACTGGTTGCAATAGGCAACATTTGCAAGGCCTTTATTACTGGGGATTTGTAATCTGAAGGAAATAATATTGGACATCAAAGTAATTGGATGCCATAATTATCAGTCTATGGTTTGGTGAAATGATGTGAATGCTGACACTCATTATGACAGTGAAAAAcaatttatttactttataGTGTCTTTTTCagtattaattttttaaatgGACAAGACCAACTGTACTTCATTTATATTATTGTTTCGTCCTTTGTCCACCTTTTTGTTTGGATGTTCACTATCAGATGTGATATTcagttttgtcttaaaattattCTACATGAATCTGCTAATCACACAACGCTATAGCTGTATTTCCTAACGTCAAGAAACCTTAATGTATGGCTATTCAGTTCATTTCTGGAAGATTTTCAGTTGATCTCAATATCAACATTTGCATTCTTCCATCAGTTCTCATCGTGTTACAAGTCAGGAGAATTTGTTTGAACATCAACTGAAGACAGCCCTAGCCTGATGATCATTTTCTATATTCTCATGCCATGTATGCTTGATGAACTACTAATATTGTGAGGGGAAGTTAGATCATGGTCtcggcttaaagggttaaatgttgggcatttaatttaatttgttatttCGAGTTCTACGGATTAATCTCCCATTTGACAGTGTGTACATAACCAAGCTTGCAAAGGGGGATTAACTTGGTGTGCAGGAATGCTATTTCTTTCCATATAATTCATTTAGATATCATAACTACCACATGCAAGCTAAACAGAGGGGGgatttgacattttttttagAAATGTTATTCCCTCTTCCCCGCTACACGGTTTGAAGGGAAATGTACTCCTATTGTTGTTCAAAGTGTGTATCGGTTGTGTTTCTATTTTATCCTTGGTGTGATTTACTGGTATTTCCTCctcctttgtcttttttcaagTGTAGTAATTAATGTATGATAATCAGTATGAAACAAAGGATCTTgtaaattgaaccaaggataaatgaACCATTTTCCAAATAACTTTGAAATATAGGGAGTCAACAACAGTATTCAAGGACCTAATGACTTAATTTACCACTCAATGCATTGGTTCAGGAAGCCAGTTTCCTCAGGTTTTTGATCTAAGATCCCTCTGTTTTCTGGACCACTAAATCGAACCACAACATATCCACCTTTTAACTGGATTTCCTTGCATTTGCATTGCTTGTACATCAAAACTGAACACAAACCTTTGATAGTGTTTAGTTGATGTCAAATGAATCAGCCTACTTCAACATTGGGTGTGTTCCTTTGGGATGTCGATCCAGATCAGGATCAATGGTCCAAGATCACTGGGATTGTGGTGCAACAAAAGAACCGAGGAATCCTTTCCCAGAGTGGATTCCTAATGGTTCCTTTGAGGCACCATGATCCAagtgatcttggatcattgATCCTGACCTTGATCGTCCCAAAGGAATGCACTCATTCATTGTCACAGGTAACAAGTTATGCCATGAATAAGCACCAGACTGCATTTTTTTT

Protein

Uniprot

Uniprot term	Description
B4GZ20	Histone-arginine methyltransferase CARMER OS=Drosophila persimilis OX=7234 GN=Art4 PE=3 SV=1
Q29B63	Histone-arginine methyltransferase CARMER OS=Drosophila pseudoobscura pseudoobscura OX=46245 GN=Art4 PE=3 SV=1
B4HJC0	Histone-arginine methyltransferase CARMER OS=Drosophila sechellia OX=7238 GN=Art4 PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF06325	PrmA	Ribosomal protein L11 methyltransferase (PrmA)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR029063	Homologous_superfamily	S-adenosyl-L-methionine-dependent methyltransferase superfamily	Interproscan
IPR025799	Family	Protein arginine N-methyltransferase	Interproscan
IPR011993	Homologous_superfamily	PH-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11006	PROTEIN ARGININE N-METHYLTRANSFERASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0016274	Molecular Function	protein-arginine N-methyltransferase activity	Interproscan
GO:0018216	Biological Process	peptidyl-arginine methylation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K05931	CARM1, PRMT4; type I protein arginine methyltransferase	EC:2.1.1.319	Chromosome and associated proteins	ko03036	deepkoala