Detailed information of pspe_0.1.m1.40518.m1 in Pachyseris speciosa

Genomic Location: Sc0000400:680247...700073
NR annotation: KAJ7385336.1, Pre-B-cell leukemia transcription factor 1 [Desmophyllum pertusum]
Species Pachyseris speciosa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
B4F6V6Pre-B-cell leukemia transcription factor 1 OS=Xenopus tropicalis OX=8364 GN=pbx1 PE=2 SV=1
Q8QGC4Pre-B-cell leukemia transcription factor 1 OS=Xenopus laevis OX=8355 GN=pbx1 PE=1 SV=1
P40424Pre-B-cell leukemia transcription factor 1 OS=Homo sapiens OX=9606 GN=PBX1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005559 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03792
all species →		PBCPBC domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR005542
all species →		DomainPBX, PBC domainInterproscan
IPR039040
all species →		FamilyNAB familyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12623
all species →		NGFI-A BINDING PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003700
all species →		Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0003712
all species →		Molecular Functiontranscription coregulator activityInterproscan
GO:0006355
all species →		Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0008134
all species →		Molecular Functiontranscription factor bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for pspe_0.1.m1.40518.m1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP